Bioconductor Qualitycontrol

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QualityControl methylationArrayAnalysis

3.2 years ago zusman • 0

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1.4k

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QualityControl Alignment QuasR

updated 4.2 years ago by Michael Stadler ▴ 350 • written 4.2 years ago by h.kozlowski • 0

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797

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folder quality QualityControl AffyExpress

4.4 years ago bastien_chassagnol • 0

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qc qualitycontrol arrayqualitymetrics mouse gene st 2.0 affymetrix

updated 7.7 years ago by James W. MacDonald 68k • written 7.7 years ago by n.lu • 0

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qualitycontrol

updated 8.1 years ago by Mike Smith ★ 6.6k • written 8.1 years ago by XIA.PAN ▴ 20

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1.2k

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shinymethyl minfi epic microarray methylationepic qualitycontrol

8.2 years ago chelsey.ju • 0

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limma one colour agilent microarrays qualitycontrol arrayqualitymetrics

8.5 years ago Bouzid.a ▴ 20

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GWASTools qualitycontrol HumanOmni5-4BeadChip GenomeStudio illumina

updated 9.0 years ago by Stephanie M. Gogarten ▴ 890 • written 9.0 years ago by Lna • 0

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1.7k

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NUSE qualitycontrol microarray

updated 9.3 years ago by Diego Diez ▴ 760 • written 9.3 years ago by jacorvar ▴ 40

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2.8k

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rna-seq GC-Content qualitycontrol

updated 9.5 years ago by Matthew McCormack ▴ 180 • written 9.5 years ago by NS ▴ 60

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limma affy probe qualitycontrol design and contrast matrix

updated 10.3 years ago by Gordon Smyth 52k • written 10.3 years ago by alakatos ▴ 130

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Microarray OneChannel TwoChannel DifferentialExpression Preprocessing QualityControl affy

17.9 years ago Amin Moghaddasi ▴ 130

12 results • Page 1 of 1

Recent ...

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Answer: Help using reduceSimMatrix with a custom annotation by sergisayolspuig ▴ 80

Hi there, `reduceSimMatrix()` expects a "GOALL" keytype in the OrgDb object when called with `children=TRUE` (which is the default for thi…

Answer: Analyzing TnSeq data with DESeq2 by cold.wolverine.arku • 0

That's a great use case of DESeq2! Even though it's not specifically tailored for TnSeq data, your approach to normalize and run explorator…

Comment: RNA Seq using Lrt by Rob • 0

So if I have understood what you have said : If i want to see if Day (time) has an effect / is being tested - then the reduced model should…

Comment: How to convert transcript counts to gene counts in R? by ben • 0

Simply summing transcripts by gene is sufficient for use with DESeq2. [sprunki clicker][1] [1]: https://sprunkiclicker.com/

Answer: EuroBioC2024 abstract submission is open! by Ali • 0

[Promo products][1] are a smart way to boost visibility, especially with exciting updates like *News: EuroBioC2024 abstract submission is o…

Votes

A: Unbalanced experiment with multiple samples from each patient.

A: Understanding contrasts limma

Answer: ROAST for small sets

A: conceptual question about FDR, FDR adjusted p-value and q-value

Awards • All

Popular Question to sergisayolspuig ▴ 80

Popular Question to richardallenfriedmanbrooklyn ▴ 30

Scholar to Gordon Smyth 52k