Bioconductor Qualitycontrol

Showing : qualitycontrol • reset

votes

replies

1.2k

views

QualityControl methylationArrayAnalysis

2.8 years ago zusman • 0

votes

1.2k

views

QualityControl Alignment QuasR

updated 3.8 years ago by Michael Stadler ▴ 350 • written 3.8 years ago by h.kozlowski • 0

votes

replies

722

views

folder quality QualityControl AffyExpress

3.9 years ago bastien_chassagnol • 0

votes

replies

1.6k

views

qc qualitycontrol arrayqualitymetrics mouse gene st 2.0 affymetrix

updated 7.3 years ago by James W. MacDonald 67k • written 7.3 years ago by n.lu • 0

votes

replies

1.1k

views

qualitycontrol

updated 7.7 years ago by Mike Smith ★ 6.6k • written 7.7 years ago by XIA.PAN ▴ 20

votes

replies

1.2k

views

shinymethyl minfi epic microarray methylationepic qualitycontrol

7.8 years ago chelsey.ju • 0

votes

replies

1.2k

views

limma one colour agilent microarrays qualitycontrol arrayqualitymetrics

8.1 years ago Bouzid.a ▴ 20

vote

replies

4.1k

views

GWASTools qualitycontrol HumanOmni5-4BeadChip GenomeStudio illumina

updated 8.6 years ago by Stephanie M. Gogarten ▴ 870 • written 8.6 years ago by Lna • 0

votes

replies

1.6k

views

NUSE qualitycontrol microarray

updated 8.9 years ago by Diego Diez ▴ 760 • written 8.9 years ago by jacorvar ▴ 40

votes

replies

2.6k

views

rna-seq GC-Content qualitycontrol

updated 9.0 years ago by Matthew McCormack ▴ 180 • written 9.1 years ago by NS ▴ 60

vote

replies

1.9k

views

limma affy probe qualitycontrol design and contrast matrix

updated 9.9 years ago by Gordon Smyth 51k • written 9.9 years ago by alakatos ▴ 130

votes

1.4k

views

Microarray OneChannel TwoChannel DifferentialExpression Preprocessing QualityControl affy

17.5 years ago Amin Moghaddasi ▴ 130

12 results • Page 1 of 1

Recent ...

Replies

Answer: Deseq2 res Function by Michael Love 43k

> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…

Answer: ANOVA like approach of edgeR by Gordon Smyth 51k

You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…

Answer: Create Illmina bead summary data by Gordon Smyth 51k

GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

OK thank you.

Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k

You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.

Votes

Answer: Deseq2 res Function

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification

Answer: ANOVA like approach of edgeR

Comment: ANOVA like approach of edgeR

Awards • All