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Comment: Margins for gene_set_enrichment_plot
by
Leonardo Collado Torres
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1.1k
Thanks! This one might be worth remaking with `ComplexHeatmap`. Similar to https://github.com/LieberInstitute/spatialLIBD/pull/91 that was …
Comment: DESeq2 - Comparing Comparisons
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James W. MacDonald
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Full disclosure: I don't use `DESeq2`, and find the contrasts specification confusing. Because of that, I generally recommend using `result…
Comment: DESeq2 - Comparing Comparisons
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sk
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0
Hi James,
Thank you for your response! Quick follow-up; if I structure my contrast as below, will it perform (A-B) - (C-D)?
res_diff <…
Comment: DESeq2: Gene is DEG in one experiment but not in the other depite similar baseMe
by
txema.heredia
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0
You could check the reply I got to a similar issue here: https://support.bioconductor.org/p/9160134/
In short, DESeq2 uses by default `ind…
Comment: EuroBioC2024 abstract submission is open!
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Jessica
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0
Mixing it up with a bunch of categories like short talks, presentation packs, posters, and contribution sessions makes sharing research and…
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