Showing : prostate • reset
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Job: Senior Postdoc/Bioinformatician Research Fellow @ UEA, Norwich, UK - New deadline
cancer nextgenerationsequencing prostate Job
4.9 years ago • updated 4.6 years ago Daniel Brewer ▴ 100
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Job: 2015 Movember Foundation PhD Studentship in Bioinformatics @ UEA, Norwich, UK
Phd NGS cancer prostate Job
8.9 years ago Daniel Brewer ▴ 100
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Job: Computational Biologist Research Associate Position at the University of Cambridge
cancer sequencing prostate Job
10.2 years ago Andy Lynch ▴ 120
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Questions regarding 'specond' r-program library package
Kidney Lung Prostate probe SpeCond Kidney Lung Prostate probe SpeCond
11.2 years ago Florence Cavalli ▴ 50
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ChIPpeakAnno query
Microarray Annotation Cancer Prostate annotate affy convert biomaRt ChIPpeakAnno Cancer
updated 11.9 years ago by ▴ 10 • written 11.9 years ago by ★ 4.3k
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limma design (paired and factorial?)
Cancer Prostate limma Cancer Prostate limma
updated 12.2 years ago by 52k • written 12.2 years ago by ▴ 30
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overview function of made4
Cancer Prostate Cancer Prostate
updated 12.6 years ago by 25k • written 12.6 years ago by ▴ 60
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[Job] Functional genomic analysis of cancer/RNAi screening
Transcription Sequencing Genetics Pathways Cancer Prostate Transcription Sequencing Cancer
13.3 years ago Sean Davis 21k
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limma suitability for correlated data
Microarray Prostate probe limma Microarray Prostate probe limma
13.3 years ago Max Mariasegaram ▴ 20
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PCR efficiency correction with HTqPCR
qPCR GO Prostate HTqPCR qPCR GO Prostate HTqPCR
updated 13.4 years ago by ★ 2.0k • written 13.4 years ago by ▴ 20
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I: R: R: R: Probe-level analysis of exon arrays using xps
Annotation Normalization Preprocessing Breast Prostate probe GLAD Category xps Annotation
13.4 years ago Lavorgna Giovanni ▴ 80
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R: R: Probe-level analysis of exon arrays using xps
Annotation Normalization Breast Prostate probe Category xps Annotation Normalization xps
updated 13.4 years ago by ★ 3.9k • written 13.4 years ago by ▴ 80
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Pairwise Comparison error
Prostate PROcess Prostate PROcess
updated 14.2 years ago by 67k • written 14.2 years ago by ▴ 40
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How to cluster genes based on their GO term in Arabidopsis?
GO Cancer Prostate goProfiles GO Cancer Prostate goProfiles
updated 14.6 years ago by 67k • written 14.6 years ago by ▴ 280
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GEOquery Meta
Cancer Prostate Cancer Prostate
updated 14.6 years ago by 21k • written 14.6 years ago by ▴ 340
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Changes in siggenes?
Prostate hgu133a2 probe affy siggenes ASSIGN Prostate hgu133a2 probe affy siggenes
updated 15.0 years ago by ▴ 900 • written 15.0 years ago by ▴ 10
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PRO-NEST postdoc position PHILIPS RESEARCH. prostate cancer functional biomarker validation (www.pro-nest.com)
Cancer Prostate Cancer Prostate
15.5 years ago Paul Hammer ▴ 220
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LOH analysis for illumina data
SNP Cancer Prostate SNP Cancer Prostate
16.4 years ago Yu Chuan Tai ▴ 440
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Comparision of expression values from 4 different studies
Microarray Cancer Prostate Microarray Cancer Prostate
19.9 years ago Margaret Gardiner-Garden ▴ 160
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cDNA raw data
Cancer Prostate affy Cancer Prostate affy
updated 20.1 years ago by 21k • written 20.1 years ago by ▴ 600
20 results • Page 1 of 1
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Comment: How can I generate a heatmap and clustering of differentially expressed genes in by Renuka • 0
Thanks Kelvin i had same doubt .Do i need to do log2 (FPKMcounts) for this
Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by georgeyu703 • 0
Michael, Thank you very much!
Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by Michael Love 43k
Yes, with the knowledge that, it is expected to be underpowered.
Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by georgeyu703 • 0
Thank you, Michael. How? Could you provide more details? Can I just do it as usual, I mean to include batch in the model?
Answer: Is there a way to do DEG analysis across two batches sharing one sample only? by Michael Love 43k
The short answer is yes, you can use even a single sample to estimate the batch effect (and therefore control for it in otherwise confounde…
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Answer: SingleCellExperiment convenience function for metadata+expression?
How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.
Answer: EdgeR Biological CVs
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
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