Bioconductor Probe to gene id

Showing : probe to gene id • reset

1

vote

4

replies

1.8k

views

probe to gene id logFC illuminahumanmethylationepicanno.ilm10b2.hg19 limma contrast matrix

updated 7.1 years ago by James W. MacDonald 68k • written 7.1 years ago by jonellevillar • 0

1

vote

3

replies

1.7k

views

probe to gene id illumina beadchip probe quality

updated 9.0 years ago by James W. MacDonald 68k • written 9.0 years ago by smt8n • 0

2

votes

3

replies

2.3k

views

affymetrix microarrays pd.porgene.1.1.st annotation probe to gene id pathway analysis

updated 9.2 years ago by James W. MacDonald 68k • written 9.3 years ago by serpalma.v ▴ 60

5

votes

2

replies

11k

views

annotate biomart probe to gene id

updated 10.5 years ago by James W. MacDonald 68k • written 10.5 years ago by rafi A ▴ 20

4 results • Page 1 of 1

Recent ...

Replies

Comment: Discrepancies in normalised count data vs unnormalised by AMgroup • 0

Thank you for your reply Here are the count plots for one example CD44: normalised: ![enter image description here][1] unnormalised: !…

Comment: Discrepancies in normalised count data vs unnormalised by ATpoint ★ 4.8k

Please show examples using `plotCounts()`. Custom spreadsheets harbor the risk of parsing errors along the way which very often explains wh…

Comment: Cannot extract size factor from DESeq2 analysis by s.malik • 0

Dear Mike, using tximeta and following code, is this fine to extract normalized counts after `sizeFactors(dds)` gives NULL? `dds <- DESeq…

Comment: Design formula for circadian time-course data for vst() function by Vishnu • 0

Thank you so much for your reply.

Comment: Analyzing TnSeq data with DESeq2 by Tom • 0

[Doncaster Locksmith][1] delivers trusted, efficient security services tailored to your needs. Analyzing TnSeq data with DESeq2 may uncover…

Votes

Answer: How to combine two DESeq2 objects (dds) for analysis

How to combine two DESeq2 objects (dds) for analysis

How can I correctly use phyloseq with Docker?

A: DESeq2::sizeFactors() function does not output the sizeFactor table.

Comment: Filtering after DESeq

Awards • All

Great Question to inzirio ▴ 10