Showing : plotly • reset
5
votes
3
replies
1.9k
views
Using BiocStyle with plotly
biocstyle plotly ggplot2
updated 7.8 years ago by ▴ 750 • written 7.8 years ago by ▴ 760
0
votes
1
reply
1.9k
views
News: Plotly uprading issue in ChAMP package
ChAMP Epigenetics plotly Shiny GUI News
8.5 years ago • updated 8.3 years ago Yuan Tian ▴ 90
0
votes
1
reply
2.8k
views
Sort each column from bar chart (stack) from lower to higher
plotly R
updated 8.5 years ago by 68k • written 8.5 years ago by ▴ 860
3 results • Page 1 of 1
Recent ...
Replies
Comment: GSEA preranked analysis downstream of DEseq2 by Ajay • 0
`logFC * -log10(pval)` seems to be the pi-score proposed in this [paper][1] [1]: https://pmc.ncbi.nlm.nih.gov/articles/PMC3957066/
Comment: error in ChAMP loading file by janwilseo • 0
Any update on this post? I also had an issue with this. [erosion control](https://charlestonhydroseeding.com/)
Answer: CluserProfiler message "No gene can be mapped" by James W. MacDonald 68k
Two things. First, the order of your term2gene is backwards (should be term and then gene, like the name), and by default `enricher` adjust…
Comment: Controlling for batch and estrus cycle using DESeq2 in RNA-seq analysis by donnycrimson • 0
One potential workaround might be to adjust for these factors using a combination of design matrices perhaps including batch as a covariate…
Comment: DESeq2 Design controlling for gender by donnycrimson • 0
On a lighter note, while you are tackling such complex data, you might enjoy a quick break playing the [Slope Game](https://slopegame.lol)…
Votes
DiffBind; Error: No sites have activity greater than filter value
remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
How to remove X & Y chromosome genes from RNAseq data
Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?
A: Unbalanced experiment with multiple samples from each patient.
Awards • All
Popular Question to Dario Strbenac ★ 1.6k
Popular Question to etiennedanis • 0
Popular Question to javier.ruizramirez • 0
Autobiographer to Paul Harrison ▴ 100
Popular Question to mohammedtoufiq91 ▴ 10
Locations • All
India, 6 minutes ago
EMBL Heidelberg, 21 minutes ago
United States, 28 minutes ago
UPF, Barcelona, Spain, 31 minutes ago
Italy, 32 minutes ago
Traffic: 526 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6