Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
plotPCA
•
reset
0
votes
2
replies
1.1k
views
Help Subsetting DDS for plotPCA for contrast groups
Rstudio
plotPCA
DESeq2
17 months ago
yee
• 0
1
vote
5
replies
1.3k
views
Mixed up sample info with plotPCA
plotMA
ggplot2
plotPCA
DESeq2
updated 19 months ago by
Michael Love
43k • written 19 months ago by
sara.jacobson
• 0
0
votes
3
replies
5.8k
views
How to change the dot size in plotPCA?
plotPCA
PCA
updated 2.1 years ago by
hediatnani
• 0 • written 2.1 years ago by
Yijing
• 0
3
votes
5
replies
3.4k
views
Plot PC1 and PC4 in plotPCA function
DESeq2
plotPCA
updated 10 months ago by
Daniele
• 0 • written 3.2 years ago by
synat.keam
• 0
3
votes
3
replies
9.9k
views
Adding sample label to PCA plot
plotpca
DESeq2
3.3 years ago
bjen731
▴ 10
2
votes
2
replies
1.9k
views
How to retain metadata after running RemoveBatchEffect() after RUVSeq to format PCA plot?
plotPCA
DESeq2
RUVSeq
removebatcheffect()
4.0 years ago
elizabethe819
• 0
1
vote
1
reply
1.2k
views
No result from plotPCA()
DESeq2
RNASeq
plotpca
updated 4.2 years ago by
Michael Love
43k • written 4.2 years ago by
s1760083
• 0
0
votes
3
replies
1.4k
views
Biplot environmental variables on top of PCA
deseq2
biplot
plotpca
updated 5.3 years ago by
Michael Love
43k • written 5.3 years ago by
ecg1g15
▴ 30
0
votes
1
reply
839
views
Comparisons between populations
deseq2
PlotPCA
draw.triple.venn
updated 6.6 years ago by
Michael Love
43k • written 6.6 years ago by
N. Perera
• 0
0
votes
1
reply
865
views
PCA analysis of 2/3 samples out of a 8 sample countmatrix
deseq2
plotpca
updated 6.6 years ago by
Michael Love
43k • written 6.6 years ago by
snp31
• 0
12
votes
1
reply
8.2k
views
identifying the samples on plotPCA
deseq2
plotpca
PCa
updated 7.5 years ago by
Michael Love
43k • written 7.5 years ago by
lirongrossmann
▴ 80
0
votes
6
replies
3.9k
views
Different PCA plots using rlog and vsd on the same data set
deseq2
rlog
variancestabilizingtransformation
plotpca
pca
7.6 years ago
lirongrossmann
▴ 80
2
votes
4
replies
3.6k
views
DESeq2 - PCAplot differs between rlog and vsd transformation
DESeq2
plotPCA
rlog transformation
vsd
7.8 years ago
Jane Merlevede
▴ 90
14
votes
5
replies
48k
views
plotPCA - how to add labels to a PCA plot
plotPCA
deseq2
labels
updated 8.3 years ago by
Federico Marini
▴ 180 • written 8.3 years ago by
al-ash
▴ 50
0
votes
0
replies
1.2k
views
group vectors around pca origins into 5 degrees arc cluster
pca
plotpca
8.6 years ago
marianarochadesouza
• 0
0
votes
3
replies
1.9k
views
Trouble with Custom PC Plot
deseq2
plotPCA
PCA
rna-seq
8.9 years ago
newsomew13
• 0
16 results • Page
1 of 1
Recent ...
Replies
Comment: Discrepancies in normalised count data vs unnormalised
by
AMgroup
• 0
Thank you for your reply Here are the count plots for one example CD44: normalised: ![enter image description here][1] unnormalised: !…
Comment: Discrepancies in normalised count data vs unnormalised
by
ATpoint
★ 4.8k
Please show examples using `plotCounts()`. Custom spreadsheets harbor the risk of parsing errors along the way which very often explains wh…
Comment: Cannot extract size factor from DESeq2 analysis
by
s.malik
• 0
Dear Mike, using tximeta and following code, is this fine to extract normalized counts after `sizeFactors(dds)` gives NULL? `dds <- DESeq…
Comment: Design formula for circadian time-course data for vst() function
by
Vishnu
• 0
Thank you so much for your reply.
Comment: Analyzing TnSeq data with DESeq2
by
Tom
• 0
[Doncaster Locksmith][1] delivers trusted, efficient security services tailored to your needs. Analyzing TnSeq data with DESeq2 may uncover…
Votes
Answer: How to combine two DESeq2 objects (dds) for analysis
How to combine two DESeq2 objects (dds) for analysis
How can I correctly use phyloseq with Docker?
A: DESeq2::sizeFactors() function does not output the sizeFactor table.
Comment: Filtering after DESeq
Awards
• All
Great Question
to
inzirio
▴ 10
Popular Question
to
enee
▴ 10
Popular Question
to
Sam
▴ 10
Popular Question
to
s.malik
• 0
Popular Question
to
shepherl
4.1k
Locations
• All
Switzerland,
24 minutes ago
WEHI, Melbourne, Australia,
33 minutes ago
United Kingdom,
1 hour ago
United States,
3 hours ago
The city by the bay,
3 hours ago
Traffic: 618 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6