Bioconductor Pearsoncorrelation

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1.2k

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correlation pearsoncorrelation rna-seq differential gene expression

updated 16 months ago by ATpoint ★ 4.8k • written 7.0 years ago by saad_k6 • 0

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940

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rna-seq gcn desq2 pearsoncorrelation

6.9 years ago aishu.jp ▴ 30

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2.2k

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microarray pearsoncorrelation coexpression spearman

updated 8.2 years ago by James W. MacDonald 68k • written 8.2 years ago by juls • 0

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2.0k

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diffbind heatmap pearsoncorrelation

updated 8.8 years ago by Rory Stark ★ 5.2k • written 8.8 years ago by shubhibartaria ▴ 10

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5.6k

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limma rnaseq batch effect pearsoncorrelation

updated 9.2 years ago by Aaron Lun ★ 28k • written 9.2 years ago by elpsakkas • 0

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11k

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gplots heatmap.2 bioconductor pearsoncorrelation average

9.8 years ago svlachavas ▴ 840

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Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Comment: Feature Counts - potential bug with outfile.jcounts by Tom • 0

[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…

Comment: Filtering after DESeq by caroline.zanchi • 0

I am going to try this right now, thanks !

Comment: Bioconductor 3.20 Release Schedule by randyprice13102000 • 0

This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/

Comment: Filtering after DESeq by ATpoint ★ 4.8k

The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …

Votes

Answer: CluserProfiler message "No gene can be mapped"

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

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