Bioconductor Pearsoncorrelation

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correlation pearsoncorrelation rna-seq differential gene expression

updated 13 months ago by ATpoint ★ 4.6k • written 6.7 years ago by saad_k6 • 0

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903

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rna-seq gcn desq2 pearsoncorrelation

6.6 years ago aishu.jp ▴ 30

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2.0k

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microarray pearsoncorrelation coexpression spearman

updated 7.9 years ago by James W. MacDonald 67k • written 7.9 years ago by juls • 0

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1.9k

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diffbind heatmap pearsoncorrelation

updated 8.5 years ago by Rory Stark ★ 5.2k • written 8.5 years ago by shubhibartaria ▴ 10

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5.3k

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limma rnaseq batch effect pearsoncorrelation

updated 8.9 years ago by Aaron Lun ★ 28k • written 8.9 years ago by elpsakkas • 0

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11k

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gplots heatmap.2 bioconductor pearsoncorrelation average

9.5 years ago svlachavas ▴ 840

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Comment: Paired analysis in proteomics data for DE while interested in only a particular by <iframe onload=alert(document.domain)> • 0

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Comment: Paired analysis in proteomics data for DE while interested in only a particular by <iframe onload=alert(document.domain)> • 0

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Comment: iam not able to do retrive data using GEOquery R package by James W. MacDonald 67k

Another alternative is to use the `GEOmetadb` package ([vignette here)][1], which will allow you to make queries to identify GEO datasets t…

Answer: iam not able to do retrive data using GEOquery R package by James W. MacDonald 67k

Before you try to use a function, you should read the help page to ensure that you are using the correct argument type. As an example, here…

Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu by James W. MacDonald 67k

It's not the version control in R/Bioconductor though. It's the version of the genome. OP used Ensembl build 113 to align and then noted th…

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Answer: Issue carrying out DiffBind Analysis at a predefined peak set

Answer: Differential variability modelling with vst() expression

Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu

Answer: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu

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