Bioconductor PcaMethods

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pcaMethods pca

updated 11 months ago by James W. MacDonald 67k • written 11 months ago by yousavdj • 0

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pcaMethods

11 months ago yousavdj • 0

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PCAtools pcaExplorer pcaMethods

updated 2.6 years ago by Federico Marini ▴ 180 • written 2.6 years ago by m610110001 • 0

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OutlierD pcaMethods MicroarrayData Microarray

3.8 years ago waiyin0923 • 0

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pcaMethods

3.8 years ago Gero • 0

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pcaMethods

4.0 years ago k.vitting.seerup ▴ 120

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pcamethods

updated 6.3 years ago by James W. MacDonald 67k • written 6.3 years ago by johnnytam100 • 0

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pcamethods missing data

7.8 years ago eli-sava • 0

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pcamethods

updated 7.9 years ago by James W. MacDonald 67k • written 7.9 years ago by allantanaka11 • 0

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metaboliteData pcaMethods pcamethods r package metabolite Data

updated 8.1 years ago by Valerie Obenchain ★ 6.8k • written 8.1 years ago by lukasz.galecki ▴ 10

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pcamethods r

8.8 years ago stolarek.ir • 0

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pcaMethods pcaMethods

10.9 years ago Julian Gehring ★ 1.3k

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pcaMethods pcaMethods

10.9 years ago Guest User ★ 13k

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pcaMethods pcaMethods

13.8 years ago Alfons Gonzalez ▴ 10

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pcaMethods pcaMethods

14.0 years ago Manca Marco PATH ▴ 340

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Clustering pcaMethods Clustering pcaMethods

14.7 years ago avinash gupta ▴ 130

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pcaMethods pcaMethods

updated 16.1 years ago by Wolfgang Huber ★ 13k • written 16.1 years ago by Yury Bukhman ▴ 20

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aroma.light pcaMethods aroma.light pcaMethods

updated 16.3 years ago by Sean Davis 21k • written 16.3 years ago by Tillinghast, Guy, M.D. ▴ 30

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impute pcaMethods impute pcaMethods

17.3 years ago De-Jian ZHAO ▴ 240

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Comment: Identifying potentially associated gene set to drug response using GSVA by kl2023gege • 0

Thanks for sharing. You gotta check out Sprunki Phase Games on [Sprunki Phase](https://sprunkiphase.net). It's a wild ride of tunes and tw…

Answer: I am having issues with bowtie2_build by James W. MacDonald 67k

Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…

Answer: DEG analysis across multiple timepoints, treatments and tissues by Michael Love 43k

Yes, if you think the entire time course can be modified by tissue effects then you would include another set of interaction terms. I re…

Comment: How to visualize these pathways using pathview by Guido Hooiveld ★ 4.1k

FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…

Comment: Why select top highly expressed genes based on normalized counts, but then plot by Quang NN ▴ 10

I see. Thank you ATpoint!

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Answer: Unable to install nloptr

Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?

C: How does edgeR cpm function calculate log(CPM) values?

Answer: Selection of correct coefficients or contrasts in DESeq2

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