Bioconductor PcaExplorer

Showing : pcaExplorer • reset

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1.8k

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DESeq2 pcaExplorer

updated 10 months ago by BioinfGuru ▴ 70 • written 11 months ago by Eric Katagirya • 0

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1.2k

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DESeq2 RNASeq PrincipalComponent pcaExplorer

written 2.4 years ago by James • 0

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2.1k

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PCAtools pcaExplorer pcaMethods

updated 2.8 years ago by Federico Marini ▴ 180 • written 2.8 years ago by m610110001 • 0

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3.8k

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PCAtools edgeR pcaExplorer RNASeq RNAseq123

3.0 years ago Alan • 0

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2.7k

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GeneTonic org.Sc.sgd.db pcaExplorer topGO EnrichmentBrowser

updated 3.2 years ago by Federico Marini ▴ 180 • written 3.2 years ago by chase.mateusiak • 0

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38k

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DESeq2 pcaExplorer

updated 4.1 years ago by Michael Love 43k • written 4.1 years ago by vanbelj ▴ 30

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2.2k

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EDA pcaExplorer PCAtools PCA

updated 3.3 years ago by Miguel ▴ 20 • written 4.6 years ago by k.vitting.seerup ▴ 120

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2.4k

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annotation go pcaExplorer AnnotationForge

updated 6.1 years ago by James W. MacDonald 68k • written 6.1 years ago by psutton • 0

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1.5k

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pcaexplorer genespca deseq2

updated 7.4 years ago by Michael Love 43k • written 7.4 years ago by sally_b86 • 0

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2.6k

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pca2go pcaexplorer

updated 7.6 years ago by Federico Marini ▴ 180 • written 7.7 years ago by reubenmcgregor88 • 0

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1.6k

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deseq2 pcaexplorer

7.7 years ago reubenmcgregor88 • 0

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1.8k

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pcaExplorer pca

updated 8.4 years ago by Federico Marini ▴ 180 • written 8.4 years ago by swaegers.janne • 0

12 results • Page 1 of 1

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Answer: WGCNA by ATpoint ★ 4.8k

> I would like to ask whether it would make sense to first normalize the count data using DESeq2 and VST before performing WGCNA. This …

Answer: cannot download atena annotation for human by Robert Castelo ★ 3.4k

Hi, sorry for the delay in getting back to you, probably by now you found the solution yourself, but just in case you didn't or anybody els…

Answer: Comparison of results obtained from a subset of the data versus the complete dat by swbarnes2 ★ 1.4k

In general, using the entire dataset and then just comparing the subgroups you want within the whole dataset is preferable.

Comment: Differential expression analysis using two TCGA datasets by ATpoint ★ 4.8k

If these are two different batches then they're fully confounded making it statistically invalid. Biologically, I find it at least question…

Answer: PhD scholar by ATpoint ★ 4.8k

Hi, please consider asking this at biostars.org as here we're mainly answering precise technical questions towards the packages. You are se…

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Answer: Origin of the labels for the SingleCellMultiModal dataset

Answer: PhD scholar

Answer: how to use `arrayWeightsQuick()`?

Having Trouble Using CNE12() and CNE21() in CNEr

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Scholar to ATpoint ★ 4.8k