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Pbase: AddIdentificationData. How can I use MSnId objects (filtered psm) to build the Proteins database
pbase MsnId mzid msnbase
updated 9.1 years ago by ▴ 80 • written 9.2 years ago by • 0
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problem with Pbase mapping vignette
Pbase
updated 9.7 years ago by ▴ 80 • written 9.7 years ago by • 0
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Bioconductor Digest, Vol 138, Issue 27
annotate biovizBase ggbio UniProt.ws Pbase annotate biovizBase ggbio UniProt.ws Pbase
updated 10.6 years ago by ▴ 490 • written 10.6 years ago by 1.6k
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Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by njmcdirect • 0
https://www.www-njmcdirect.run/
Answer: DiffBind - question on the use of filtered or unfiltered input data by blackleatherjackets.blj • 0
Great discussion! Clarifying filtered vs. unfiltered input in DiffBind really helps deepen understanding. Appreciate the detailed responses…
Comment: Support of parquet files for on-disk Bioconductor objects by wizachristine32 • 0
@[geometry dash][1] Thanks everyone for this super informative thread - really appreciate all the detailed exploration here. I've also been…
Comment: error in ChAMP loading file by barkerxavierr • 0
You have saved your pd object as 'SampleSheet', which is not what champ.load is reading in (it's finding the semi-colon separated file call…
Answer: DiffBind - question on the use of filtered or unfiltered input data by apkffh4x • 0
Yes, you can use HR peaks as input to DiffBind, especially if your goal is high-confidence differential binding, but using all peaks provid…
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