Bioconductor Paired test

Showing : paired test • reset

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paired test

written 21.9 years ago by Phguardiol@aol.com ▴ 720

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2.3k

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limma voom rna-seq paired test unpaired test

updated 4.9 years ago by Gordon Smyth 52k • written 4.9 years ago by dagsbio • 0

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2.4k

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paired test limma

updated 6.7 years ago by Aaron Lun ★ 28k • written 6.7 years ago by fansili2013 ▴ 50

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1.4k

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deseq2 multifactorial design paired test

updated 8.0 years ago by Michael Love 43k • written 8.0 years ago by gregory.l.stone ▴ 10

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1.6k

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Illumina 450k ChAMP paired test

9.0 years ago walter_teng • 0

5 results • Page 1 of 1

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Answer: Using genomicRanges / plyranges to calculate score of peaks within intervals by Michael Love 43k

This should be possible with plyranges using `join_overlap` and `group_by` on the metadata from the tile. E.g. create `tile.id` as a variab…

Answer: Reducing and aggregating GRanges with gaps using plyranges by Michael Love 43k

I added `min.gapwidth` to `reduce_ranges()` in recent plyranges releases: https://github.com/tidyomics/plyranges/pull/105

Answer: Find exact GRanges match keeping metadata columns by Michael Love 43k

You could use `minoverlap` but that requires an integer, not a fraction: ``` gr1 |> join_overlap_left(gr2, minoverlap=6) ``` Plyranges do…

Comment: Unused arguments error without used arguments in GSVA? by 1sunmic2 • 0

It was due to the comma. Thank you!

Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…

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Answer: Unused arguments error without used arguments in GSVA?

Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

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Teacher to Axel Klenk ★ 1.1k