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package submission
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1.3k
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News:
New Package and New Docker Image Submission Deadline for Bioc Release 3.11
release
package submission
docker
deadline
News
4.9 years ago
shepherl
4.1k
0
votes
1
reply
738
views
Software package submission: valid push, but not response/review
package submission
review
updated 4.9 years ago by
Hervé Pagès
16k • written 4.9 years ago by
whou10
• 0
1
vote
0
replies
898
views
News:
Package Submission Deadline is TODAY!!
release
new submission
package submission
deadline
News
5.4 years ago
shepherl
4.1k
0
votes
0
replies
972
views
News:
New Package Submission Deadline for Bioc Release 3.10
release
package submission
deadline
new package
News
5.4 years ago
shepherl
4.1k
1
vote
2
replies
2.3k
views
Dealing With Package Sizes Greater than 5 MB
data
package submission
BiocCheck
5.6 years ago
j.flesch
▴ 10
0
votes
0
replies
958
views
News:
Package Submission Deadline is TODAY!!
release
package submission
new submission
deadline
News
5.9 years ago
shepherl
4.1k
1
vote
0
replies
1.0k
views
News:
New Package Submission Deadline for Bioc Release 3.9
release
package submission
new packages
deadline
News
5.9 years ago
shepherl
4.1k
0
votes
1
reply
1.1k
views
News:
Package Submission Deadline is TODAY!!
release
package submission
new submission
deadline
News
6.4 years ago
shepherl
4.1k
2
votes
0
replies
896
views
News:
New Package Submission Deadline for Bioc Release 3.8
release
package submission
News
6.4 years ago
shepherl
4.1k
0
votes
0
replies
1.1k
views
News:
Bioconductor 3.6 release: new package deadline
package submission
bioconductor
release
News
7.4 years ago
shepherl
4.1k
0
votes
0
replies
941
views
News:
Deadline for Packages and Data Bioc3.6
release
package submission
News
7.4 years ago
shepherl
4.1k
0
votes
1
reply
1.3k
views
Question about sumbition process and biocviews
biocviews
biocparallel
github
package submission
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
ioannis.vardaxis
▴ 30
0
votes
1
reply
1.2k
views
What happends with a package in submission through the old issue tracker?
github
package submission
rDGIdb
issue tracker
updated 8.6 years ago by
Martin Morgan
25k • written 8.6 years ago by
Thomas Thurnherr
• 0
13 results • Page
1 of 1
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Replies
Answer: SingleR with multiple single cell references
by
Aaron Lun
★ 28k
> Is it necessary to piece together the individual steps manually (e.g. aggregateReference, trainSingleR, classifySingleR, combineRecompute…
Answer: Automatically install dependencies
by
ATpoint
★ 4.7k
The BiocManager, which is sort of an extended wrapper around `install.packages`, installs all R dependencies. If you see errors then this i…
Answer: To count or not to count multi-overlapping reads?
by
Gordon Smyth
52k
> How does it handle reads that map to a gene that is located in a region that also has another gene but on the alternate strand? Overlapp…
Comment: Weird p-values using DESeq2?
by
ATpoint
★ 4.7k
This does not look like normalized counts but raw counts. Consider using `counts(dds, normalized = TRUE)` or the output of `normTransform()…
Answer: Weird p-values using DESeq2?
by
Wolfgang Huber
★ 13k
Dear Ingrid, thank you for asking. Can you provide the input count matrix (you can "pseudonymize" the biological conditions and the gene n…
Votes
A: Fraction count for multi mapping reads; how to generate input file for Deseq2 fo
Comment: Weird p-values using DESeq2?
Comment: Overcoming confounding in batch effect correction
Answer: Store Matrix in DataFrame Cell
Answer: enrichGOgradient color change
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