Bioconductor Pacbio

Showing : pacbio • reset

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161

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pacbio sublong Rsubread

3 months ago thomas.heigl.ibk • 0

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814

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pacbio isoform

written 2.1 years ago by lhaiyan3 • 0

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1.9k

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pacbio pbi

6.7 years ago Frocha ▴ 20

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3.8k

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rnaseq data integration single-cell pacbio across species Job

6.8 years ago bgee • 0

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1.8k

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shortread pacbio fastq

updated 6.9 years ago by Martin Morgan 25k • written 6.9 years ago by benjamin.j.callahan ▴ 50

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2.3k

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gviz bam pacbio

updated 8.7 years ago by florian.hahne@novartis.com ★ 1.6k • written 8.7 years ago by thackl • 0

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Comment: Problems with oarfish + tximport + swish by Michael Love 43k

Great thanks for posting the issue and sticking with it Annaleigh

Comment: Problems with oarfish + tximport + swish by brown.annaleigh • 0

Awesome possum! Update works!! Thank you so much for the help and guidance!

Comment: Postdoctoral Researcher in Spatial Gene Regulatory Networks underlying Stomatal by iqratechnology4 • 0

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Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt? by James W. MacDonald 67k

> BTW, shouldn't you be using keep.lib.sizes = F and re-do the calcNormFactors() after filtering of the dglst low-expression ENSGs, as Gord…

Comment: Problems with oarfish + tximport + swish by Michael Love 43k

Let me see if I can add some code to tximeta to cover this case. I've added an argument `skipRanges` in devel branch which should allow: …

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Answer: Error in download.file for TCGAutils::symbolsToRanges

Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Answer: Limma Interaction Effect with Covariates

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