Bioconductor Pacbio

Showing : pacbio • reset

votes

replies

134

views

pacbio sublong Rsubread

9 weeks ago thomas.heigl.ibk • 0

votes

replies

802

views

pacbio isoform

written 2.0 years ago by lhaiyan3 • 0

votes

1.9k

views

pacbio pbi

6.6 years ago Frocha ▴ 20

votes

replies

3.7k

views

rnaseq data integration single-cell pacbio across species Job

6.7 years ago bgee • 0

votes

replies

1.8k

views

shortread pacbio fastq

updated 6.8 years ago by Martin Morgan 25k • written 6.8 years ago by benjamin.j.callahan ▴ 50

votes

replies

2.2k

views

gviz bam pacbio

updated 8.6 years ago by florian.hahne@novartis.com ★ 1.6k • written 8.6 years ago by thackl • 0

6 results • Page 1 of 1

Recent ...

Replies

Comment: Feature Counts - potential bug with outfile.jcounts by chris2.a.white • 0

Hi @gordonsmyth and @weishi, Firstly, thank you for offering your time to develop the junction quantification module further. This is gre…

Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by xiaofeiwang198266 • 0

Hi Tim, Thanks for your reply! Yes, my data is 450K, and it is TCGA methylation data downloaded by TCGAbiolinks. The problem is that I can …

Answer: Error in get_anno_data(ontology) : ontology not supported yet... by Guido Hooiveld ★ 4.1k

Did you check the help page for the function `enrichDO`? Type `?enrichDO`. I am asking, because there it is stated that the argument `ont`…

Comment: Build error on kunpeng2 Linux aarch64 by martin.grigorov ▴ 10

Hi, There was a problem with `icu` and because of that the (r)curl library was not installed. The system/OS curl library is one version ol…

Answer: Standardization of rlog transformed counts before PCA by ATpoint ★ 4.6k

I guess you mean scaling in terms of Z-scoring? There are plenty of posts towards scaling in PCA both here on Bioconductor and in other com…

Votes

Comment: Feature Counts - potential bug with outfile.jcounts

Answer: Feature Counts - potential bug with outfile.jcounts

Comment: Can we get beta values with DMRcate package

Answer: Can we get beta values with DMRcate package

DiffBind giving different results from dba.report() and dba.analyze(..., bRetrieveAnalysis=TRUE)

Awards • All

Popular Question to martin.grigorov ▴ 10

Scholar to James W. MacDonald 67k