Bioconductor Offtopic

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BUScorrect offtopic

updated 7 weeks ago by shepherl 4.1k • written 7 weeks ago by 2zrcj3448p 0

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RNA-Seq sequencer library_size sequency_depth multiplexing offtopic

updated 21 months ago by James W. MacDonald 67k • written 21 months ago by FedeXandeR • 0

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mygene offtopic

updated 24 months ago by James W. MacDonald 67k • written 24 months ago by Shila • 0

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derfinderData SpikeInSubset musicatk Guitar offtopic

updated 2.2 years ago by Marcel Ramos 700 • written 2.2 years ago by Chanchal • 0

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Rscript tidyr dataframe tidyverse offtopic

updated 2.5 years ago by Marcel Ramos 700 • written 2.5 years ago by Nikhil • 0

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MicrobiomeData microbiome offtopic

updated 3.5 years ago by James W. MacDonald 67k • written 3.5 years ago by gwagz8 • 0

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ChIPSeq SICER2 DiffBind MACS2 offtopic

updated 3.7 years ago by James W. MacDonald 67k • written 3.7 years ago by Yuan Tian ▴ 290

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Comment: Unused arguments error without used arguments in GSVA? by 1sunmic2 • 0

It was due to the comma. Thank you!

Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…

Answer: Restricting differential binding analysis to only TSS-proximal regions by Aaron Lun ★ 28k

Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…

Comment: Sample-specific methylation values using QSEA by User3088 • 0

Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…

Comment: input for singR function by iamin053 • 0

Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!

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Answer: Unused arguments error without used arguments in GSVA?

Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

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Teacher to Axel Klenk ★ 1.1k