Bioconductor Nondetects

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454

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qPCR nondetects

15 months ago Ed Siefker ▴ 230

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915

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bug nondetects HTqPCR

updated 16 months ago by Nat.Nataren • 0 • written 17 months ago by Ed Siefker ▴ 230

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680

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nondetects qPCR qPCRData

3.7 years ago jhackett ▴ 30

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1000

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nondetects qpcrImpute

updated 5.7 years ago by Matthew McCall ▴ 830 • written 6.0 years ago by D.J.Coulson2 • 0

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2.1k

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nondetects software error

updated 7.0 years ago by corocla • 0 • written 7.1 years ago by Ryan C. Thompson ★ 7.9k

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2.4k

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qPCRset object nondetects r package txt

updated 16 months ago by Nat.Nataren • 0 • written 7.1 years ago by s.m.may • 0

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1.6k

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nondetects R PCR

updated 7.5 years ago by Matthew McCall ▴ 830 • written 7.5 years ago by garciaii_antuerpia • 0

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Answer: SingleR with multiple single cell references by Aaron Lun ★ 28k

> Is it necessary to piece together the individual steps manually (e.g. aggregateReference, trainSingleR, classifySingleR, combineRecompute…

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The BiocManager, which is sort of an extended wrapper around `install.packages`, installs all R dependencies. If you see errors then this i…

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> How does it handle reads that map to a gene that is located in a region that also has another gene but on the alternate strand? Overlapp…

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This does not look like normalized counts but raw counts. Consider using `counts(dds, normalized = TRUE)` or the output of `normTransform()…

Answer: Weird p-values using DESeq2? by Wolfgang Huber ★ 13k

Dear Ingrid, thank you for asking. Can you provide the input count matrix (you can "pseudonymize" the biological conditions and the gene n…

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