Bioconductor Narrowpeaks

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Rsubread atac-seq narrowpeaks featurecounts

updated 7.3 years ago by Wei Shi ★ 3.6k • written 7.3 years ago by j.bergenstrahle ▴ 90

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Chipseq DNAseq ATAC bayespeak narrowpeaks

updated 9.8 years ago by Gordon Smyth 52k • written 9.8 years ago by samuel collombet ▴ 140

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ChIPSeq chipseq NarrowPeaks ChIPSeq chipseq NarrowPeaks

10.9 years ago Robert Chase ▴ 10

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GO DiffBind NarrowPeaks GO DiffBind NarrowPeaks

11.1 years ago Rory Stark ★ 5.2k

4 results • Page 1 of 1

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Comment: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf by AB ▴ 110

Force=TRUE did the trick. Thank you.

Comment: www.stats.ox.ac.uk seems to be off, leading to errors/delays when installing pac by DENG • 0

[https://github.com/djunsheep/CRANextra/blob/main/README.md][1] add the following to the `.Rprofile` and `Rprofile.site` # fixing the…

Comment: Transcript ID Mismatch in riboWaltz Annotation Table by shepherl 4.1k

riboWalze is not a Bioconductor package and does not appear to be a Bioconductor function; the maintainer is not guaranteed to be on this …

Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf by shepherl 4.1k

What is your `sessionInfo()`? I just tried locally and it works fine so there might have been a bad or interrupted download when initially…

Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Votes

Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf

Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

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Popular Question to James W. MacDonald 68k