Bioconductor Mus musculus

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ppi stringdb mus musculus

updated 6.9 years ago by damian.szk ▴ 110 • written 6.9 years ago by hkarakurt ▴ 20

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1.6k

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biomart TF biotype ensembl mus musculus

updated 7.0 years ago by Mike Smith ★ 6.6k • written 7.0 years ago by rbronste ▴ 60

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Mus musculus GenomeInfoDb Mus musculus GenomeInfoDb

updated 10.6 years ago by Sonali Arora ▴ 390 • written 10.6 years ago by Guest User ★ 13k

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Mus musculus BSgenome BSgenome Mus musculus BSgenome BSgenome

updated 11.3 years ago by Hervé Pagès 16k • written 11.3 years ago by Diego Diez ▴ 760

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1.6k

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GO Mus musculus BSgenome BSgenome lumi GO Mus musculus BSgenome BSgenome lumi

updated 11.6 years ago by Pan Du ▴ 440 • written 11.6 years ago by Guest User ★ 13k

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RNASeq Microarray Normalization GO Classification Clustering Cancer Mus musculus probe GO

11.9 years ago Matthew Thornton ▴ 380

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3.6k

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Mus musculus biomaRt ChIPpeakAnno Mus musculus biomaRt ChIPpeakAnno

11.9 years ago Julie Zhu ★ 4.3k

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Annotation GO Mus musculus PROcess topGO Annotation GO Mus musculus PROcess topGO

14.9 years ago Dick Beyer ★ 1.4k

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1.5k

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GO Mus musculus PROcess topGO GO Mus musculus PROcess topGO

updated 14.9 years ago by Sean Davis 21k • written 14.9 years ago by Dick Beyer ★ 1.4k

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Annotation Mus musculus probe affy Annotation Mus musculus probe affy

15.2 years ago Robert Castelo ★ 3.4k

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1.8k

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Mus musculus biomaRt GenomeGraphs Mus musculus biomaRt GenomeGraphs

updated 15.7 years ago by steffen@stat.Berkeley.EDU ▴ 600 • written 15.7 years ago by Mark Robinson ★ 1.1k

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BiocViews Annotation Cancer Mus musculus illuminaHumanv1 illuminaHumanv2 probe annotate

16.6 years ago Lynn Amon ▴ 280

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1.4k

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Microarray Organism Mus musculus AnnBuilder Microarray Organism Mus musculus AnnBuilder

updated 19.7 years ago by John Zhang ★ 2.9k • written 19.7 years ago by Christopher Wilkinson ▴ 140

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Microarray Mus musculus limma Microarray Mus musculus limma

updated 19.8 years ago by Gordon Smyth 52k • written 19.8 years ago by Humberto Ortiz Zuazaga ▴ 10

14 results • Page 1 of 1

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Comment: accounting for vs. removing batch effects with DESeq2 in RNAseq analysis by Blair • 0

@[Sprunki][1] wrote: Please read the vignette and think about adhering to the author's best practice, which discusses batch impacts. [1…

Comment: error in ChAMP loading file by 81becky • 0

hi Giulia, it sounds like you're facing a frustating issue with your chAMP import. One common suggestion is to double-check your CSV fomat…

Answer: DESeq2 adujsted p-value cutoff seemingly not working by James W. MacDonald 68k

From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…

Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0

Thank you, I will try this and see.

Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0

Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…

Votes

A: Effect of lfcThreshold on p-value in DESeq2

Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet

What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =

Comment: Unused arguments error without used arguments in GSVA?

Awards • All

Popular Question to Vincent J. Carey, Jr. 6.7k

Teacher to Gordon Smyth 52k

Scholar to James W. MacDonald 68k