Bioconductor Missing value imputation

Showing : missing value imputation • reset

3

votes

2

replies

1.7k

views

DEP missing value imputation proteomics rforproteomics

6.9 years ago • updated 6.7 years ago alex.gos90 ▴ 10

2

votes

3

replies

2.5k

views

impute missing value imputation DEP massspectrometry

updated 6.9 years ago by Laurent Gatto 1.6k • written 6.9 years ago by serpalma.v ▴ 60

0

votes

0

replies

1.6k

views

missing data missing value imputation impute MICE bioconductor

9.1 years ago svlachavas ▴ 830

3 results • Page 1 of 1

Recent ...

Replies

Answer: Combining RNAseq and microarray data using edgeR/limma-voom by Gordon Smyth 51k

I agree with James, although I tend to combine analyses using geneset tests rather than by meta analysis tools like GeneMeta. > My questio…

Comment: Adjusted p-values become NA when sub-setting samples by txema.heredia • 0

Thanks! I've been looking into DESeq2's code and, indeed, I get matching results when running manually the code inherited from the `genefi…

Answer: DESeq2 interaction between cancer cells and microenvironment cells by Michael Love 42k

I don't really know what you mean by "come from the contamination". You can look at the main effects and the interaction, but I don't know …

Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Fahd • 0

Thanks for looking into this. This issue results in the incorrect usage of multiple ORA software including EnrichR.

Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Guido Hooiveld ★ 4.1k

Yes, I understand the implications of replacing the `OrgDb` packages in release. Maybe an upload to the annotationHub or GitHub could be an…

Votes

A: p.adjust BH generates duplicate values

Awards • All

Supporter to Paul Harrison ▴ 100

Popular Question to Mikhail Dozmorov ▴ 30