Bioconductor Missing data

Showing : missing data • reset

vote

replies

2.0k

views

Missing Data TCGAbiolinks Kaplan-Meier LIHC Xenabrowser

5.3 years ago jam526 • 0

votes

replies

3.3k

views

deseq2 sample_table missing data

updated 6.1 years ago by g.wang2 • 0 • written 10.0 years ago by anpham ▴ 60

votes

1.7k

views

deseq2 paired samples missing data multiple treatments

updated 6.3 years ago by Michael Love 43k • written 6.3 years ago by greg.deakin • 0

votes

replies

3.0k

views

limma missing data methylation normalization

updated 7.4 years ago by Aaron Lun ★ 28k • written 7.4 years ago by mheydarpour ▴ 10

votes

replies

2.8k

views

limma contrast missing data lmfit makecontrasts

updated 7.5 years ago by Gordon Smyth 52k • written 7.6 years ago by wewolski ▴ 10

votes

replies

1.0k

views

pcamethods missing data

7.9 years ago eli-sava • 0

votes

replies

8.6k

views

software error rnaseq wgcna missing data

9.2 years ago • updated 8.9 years ago dvillarlozano ▴ 10

votes

1.2k

views

cellhts2 upload missing data

updated 9.1 years ago by Joseph Barry ▴ 160 • written 9.1 years ago by zmorehouse • 0

vote

1.2k

views

missing data filter

updated 9.3 years ago by James W. MacDonald 68k • written 9.3 years ago by rgescudero • 0

votes

replies

1.7k

views

missing data missing value imputation impute MICE bioconductor

9.4 years ago svlachavas ▴ 840

votes

1.6k

views

software error missing data workflowinstall

9.8 years ago anoll2 • 0

votes

replies

1.5k

views

bayseq missing data

9.9 years ago k.w.lau • 0

12 results • Page 1 of 1

Recent ...

Replies

Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Comment: orgDB by jenniferping36 • 0

Thanks for the suggestion! I'll check out the resources.

Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

Votes

Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

Awards • All