Bioconductor MinfiDataEPIC

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minfiDataEPIC minfi

updated 7 days ago by Garbayo • 0 • written 9 days ago by rania.alanany • 0

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DNA minfiData minfiDataEPIC DNAMethylation minfi

6 weeks ago user_bioinfo • 0

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minf minfiDataEPIC MethylationArrayData MethylationArray EPICv2manifest

7 weeks ago charlie.wright • 0

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minfiDataEPIC

9 months ago yemeijie123 • 0

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minfi minfiDataEPIC

updated 3 months ago by macdonaldfrench7286566 • 0 • written 11 months ago by e1271094 • 0

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minfi minfiDataEPIC

13 months ago Felix • 0

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minfiDataEPIC minfi

updated 16 months ago by Basti ▴ 780 • written 16 months ago by Ana • 0

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Annotation annotate DifferentialMethylation minfiDataEPIC

updated 18 months ago by Basti ▴ 780 • written 18 months ago by titangerd • 0

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minfiDataEPIC EpicV2

updated 18 months ago by Zuguang Gu ▴ 290 • written 19 months ago by Izabela.ams • 0

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minfiDataEPIC minfi

updated 19 months ago by James W. MacDonald 68k • written 19 months ago by phelankj ▴ 10

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minfiDataEPIC methylationArrayAnalysis

updated 20 months ago by ATpoint ★ 4.8k • written 20 months ago by rae.alshammari ▴ 20

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methylationArrayAnalysis minfi MethylationArrayData minfiDataEPIC MethylationArray

updated 2.0 years ago by Gordon Smyth 52k • written 2.0 years ago by Grace • 0

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Quantile noob Normalization minfi minfiDataEPIC

updated 2.6 years ago by James W. MacDonald 68k • written 2.6 years ago by mikat • 0

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minfiDataEPIC #SexPrediction minfi

updated 3.5 years ago by Basti ▴ 780 • written 3.5 years ago by nucasa • 0

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minfiData plotsex minfi minfiDataEPIC r

updated 4.1 years ago by suman • 0 • written 4.1 years ago by Bethan • 0

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minfiDataEPIC arrays limma minfi Epigenetics

updated 4.4 years ago by Gordon Smyth 52k • written 4.4 years ago by Jeff ▴ 20

16 results • Page 1 of 1

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Comment: DESeq2 - human data, weird results, troubleshooting by bd2000 ▴ 30

I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin by James W. MacDonald 68k

The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…

Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0

Thank you so much for sharing the link.

Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0

I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…

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Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin

Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

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