Bioconductor Methylkit

Showing : methylkit • reset

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226

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methylKit

updated 11 weeks ago by James W. MacDonald 67k • written 11 weeks ago by Satyanarayan • 0

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355

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methylKit

updated 5 months ago by alex.gos90 ▴ 10 • written 5 months ago by Krisztina • 0

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892

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methylKit

updated 9 months ago by James W. MacDonald 67k • written 9 months ago by CHEN • 0

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354

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methylKit

9 months ago Modoc Kesner ▴ 10

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743

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methylKit

17 months ago Andrés • 0

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776

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methRead methylkit

2.1 years ago liulip • 0

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878

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methyl methylKit

2.8 years ago hasche • 0

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1.9k

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GenomicRanges methylKit S4Vectors

updated 2.8 years ago by James W. MacDonald 67k • written 2.8 years ago by hasche • 0

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1.5k

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methylkit

updated 3.2 years ago by alex.gos90 ▴ 10 • written 3.6 years ago by hasche • 0

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1.7k

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methylation methylKit bsseq

updated 3.2 years ago by alex.gos90 ▴ 10 • written 3.5 years ago by Arindam ▴ 80

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1.6k

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annotateWithGeneParts methylKit

3.3 years ago tanmayroy1979 ▴ 20

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1.5k

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methylkit normalizecoverage NA

updated 6.2 years ago by altuna akalin ▴ 20 • written 6.2 years ago by GFM ▴ 20

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1.4k

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R bioconductor methylation methylkit

updated 6.5 years ago by altuna akalin ▴ 20 • written 6.5 years ago by nilaycan • 0

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1.9k

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methylkit Tutorial

updated 7.1 years ago by Martin Morgan 25k • written 7.1 years ago by s1432985 • 0

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2.0k

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methylKit

updated 7.5 years ago by altuna akalin ▴ 20 • written 7.5 years ago by ch8316f5eyu • 0

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2.0k

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methylKit

7.6 years ago kamal.fartiyal84 ▴ 10

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1.8k

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methylKit bioconductor

updated 8.4 years ago by Martin Morgan 25k • written 8.4 years ago by tangming2005 ▴ 200

17 results • Page 1 of 1

Recent ...

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Answer: Newbie Question - adding metadata to an analysis by James W. MacDonald 67k

See [Section 4][1]. But do note that you do not need for the `phenoData` slot to contain the data. You can simply have a 'targets' data.fra…

Comment: Want numbers in DESeq to be seen as numerical, not categorical by swbarnes2 ★ 1.4k

How did you import the data? Did you accidently leave in `stringAsFactors=True`? But I'm not entirely sure that you don't want that to be…

Comment: MissMethyl failed to use gometh function for EPICv2 by James W. MacDonald 67k

By version 1.38.0, I mean version 1.38.0 of `MissMethyl`.

Answer: MissMethyl failed to use gometh function for EPICv2 by James W. MacDonald 67k

You need to [upgrade to the release version of Bioconductor][1]. You have version 1.38.0 installed which indicates that you are using the p…

Comment: EuroBioC2023 abstract submission closing soon! by Jeremy • 0

Thanks for the reminder! If you're a Bioconductor user or developer, make sure to [tabs][1] submit your abstract by the deadline, Monday, A…

Votes

Comment: Theoretical WGCNA Question

Answer: Is it possible to work with DESeq2 where data is not properly matched for sex a

Comment: Comparing different method for DESEQ2

Answer: How do I fix an odd voom plot in a combined dataset?

Awards • All

Scholar to Michael Love 43k