Bioconductor MethylKit

Showing : methylKit • reset

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262

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methylKit

updated 3 months ago by James W. MacDonald 67k • written 3 months ago by Satyanarayan • 0

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386

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methylKit

updated 6 months ago by alex.gos90 ▴ 10 • written 6 months ago by Krisztina • 0

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970

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methylKit

updated 10 months ago by James W. MacDonald 67k • written 10 months ago by CHEN • 0

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372

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methylKit

10 months ago Modoc Kesner ▴ 10

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769

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methylKit

18 months ago Andrés • 0

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793

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methRead methylkit

2.1 years ago liulip • 0

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894

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methyl methylKit

2.8 years ago hasche • 0

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1.9k

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GenomicRanges methylKit S4Vectors

updated 2.9 years ago by James W. MacDonald 67k • written 2.9 years ago by hasche • 0

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1.5k

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methylkit

updated 3.3 years ago by alex.gos90 ▴ 10 • written 3.7 years ago by hasche • 0

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1.8k

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methylation methylKit bsseq

updated 3.3 years ago by alex.gos90 ▴ 10 • written 3.6 years ago by Arindam ▴ 80

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1.7k

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annotateWithGeneParts methylKit

3.4 years ago tanmayroy1979 ▴ 20

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1.5k

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methylkit normalizecoverage NA

updated 6.3 years ago by altuna akalin ▴ 20 • written 6.3 years ago by GFM ▴ 20

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1.4k

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R bioconductor methylation methylkit

updated 6.5 years ago by altuna akalin ▴ 20 • written 6.5 years ago by nilaycan • 0

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1.9k

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methylkit Tutorial

updated 7.2 years ago by Martin Morgan 25k • written 7.2 years ago by s1432985 • 0

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2.0k

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methylKit

updated 7.6 years ago by altuna akalin ▴ 20 • written 7.6 years ago by ch8316f5eyu • 0

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2.0k

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methylKit

7.6 years ago kamal.fartiyal84 ▴ 10

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1.8k

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methylKit bioconductor

updated 8.4 years ago by Martin Morgan 25k • written 8.4 years ago by tangming2005 ▴ 200

17 results • Page 1 of 1

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Comment: Unused arguments error without used arguments in GSVA? by 1sunmic2 • 0

It was due to the comma. Thank you!

Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…

Answer: Restricting differential binding analysis to only TSS-proximal regions by Aaron Lun ★ 28k

Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…

Comment: Sample-specific methylation values using QSEA by User3088 • 0

Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…

Comment: input for singR function by iamin053 • 0

Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!

Votes

Answer: Unused arguments error without used arguments in GSVA?

Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

Awards • All

Teacher to Axel Klenk ★ 1.1k