Showing : meta analysis • reset
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metaDE R and RRA R
microarray meta analysis
5.0 years ago lily ▴ 20
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Meta_analysis of microarray data
microarray microarray data Meta Analysis platform
updated 5.9 years ago by 67k • written 5.9 years ago by • 0
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Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 6.1 years ago by 67k • written 6.1 years ago by • 0
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how to convert DEGs indices to gene symbols or gene names which i get during meta analysis through MAMA package using pvalcombination function and me…
MAMA pvalcombination meta analysis metaMA DEGs' indices
6.8 years ago niteshkumar20sept • 0
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meta de r package
meta analysis
7.2 years ago lily ▴ 20
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Meta Analysis on CAMERA results
limma camera cohen d meta analysis
7.9 years ago Andy91 ▴ 60
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meta analysis of clc output(differential expression data )
rnaseq metaseq clc output pvalue meta analysis
updated 8.1 years ago by ▴ 10 • written 8.1 years ago by • 0
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combine different GSE on different GPL
annotation genesymbols meta analysis
8.8 years ago wahaha123 • 0
8 results • Page 1 of 1
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Answer: I am having issues with bowtie2_build by James W. MacDonald 67k
Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…
Answer: DEG analysis across multiple timepoints, treatments and tissues by Michael Love 43k
Yes, if you think the entire time course can be modified by tissue effects then you would include another set of interaction terms. I re…
Comment: How to visualize these pathways using pathview by Guido Hooiveld ★ 4.1k
FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…
Comment: Why select top highly expressed genes based on normalized counts, but then plot by Quang NN ▴ 10
I see. Thank you ATpoint!
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by Prakash Sah • 0
Thanks James!
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Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?
C: How does edgeR cpm function calculate log(CPM) values?
Answer: Selection of correct coefficients or contrasts in DESeq2
Answer: Selection of correct coefficients or contrasts in DESeq2
A: PDCD1 missing from TxDb.Hsapiens.UCSC.hg38.knownGene?
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