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metaDE R and RRA R
microarray meta analysis
4.8 years ago lily ▴ 20
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Meta_analysis of microarray data
microarray microarray data Meta Analysis platform
updated 5.7 years ago by 67k • written 5.7 years ago by • 0
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Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 5.8 years ago by 67k • written 5.8 years ago by • 0
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how to convert DEGs indices to gene symbols or gene names which i get during meta analysis through MAMA package using pvalcombination function and me…
MAMA pvalcombination meta analysis metaMA DEGs' indices
6.5 years ago niteshkumar20sept • 0
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meta de r package
meta analysis
7.0 years ago lily ▴ 20
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Meta Analysis on CAMERA results
limma camera cohen d meta analysis
7.7 years ago Andy91 ▴ 60
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meta analysis of clc output(differential expression data )
rnaseq metaseq clc output pvalue meta analysis
updated 7.9 years ago by ▴ 10 • written 7.9 years ago by • 0
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combine different GSE on different GPL
annotation genesymbols meta analysis
8.6 years ago wahaha123 • 0
8 results • Page 1 of 1
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Comment: Appropriate ways to filter counts data for voom/limma by dorothylminter • 0
The proper way to filter count data for voom/limma emphasizes the importance of choosing the right filtering technique to enhance detection…
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by Robert Castelo ★ 3.4k
Hi, this is a long comment thread on 4-year old post, please open a new post with you question. To increase the odds of getting useful answ…
Comment: DESeq2 rerun returns different results by ATpoint ★ 4.5k
DESeq2 is deterministic if you use same input, code and software versions. Make sure to version-control your environment by at least tracki…
Answer: [How to construct a model.matrix ] by Gordon Smyth 51k
> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0
Hi Robert, Thank you for the explanation, But I am still little bit confused, Is the annotation package (TxDb.Hsapiens.UCSC.hg38.knownGene)…
Votes
A: Some questions for remove batch effect by using mnnCorrect
A: Recommendations for combining multiple 10x runs into one SingleCellExperiment
Answer: [How to construct a model.matrix ]
Answer: Handling biological replicates in DESeq2
Comment: biomaRt rnorvegicus_gene_ensembl not available anymore
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