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mart
•
reset
0
votes
0
replies
444
views
News:
Ensembl 113 has been released
ensembl
ensembldb
mart
biomaRt
5 months ago
Ensembl_Jorge
• 0
0
votes
1
reply
1.6k
views
Accessing local installation of biomart results in "Unexpected format to the list of available marts"
mart
martconfigurator
biomaRt
xml
updated 4.3 years ago by
Mike Smith
★ 6.6k • written 4.3 years ago by
anhvo711
• 0
1
vote
0
replies
1.0k
views
News:
Ensembl 100 has been released
biomart
ensembl
e100
mart
news
News
4.9 years ago
Thomas Maurel
▴ 800
0
votes
2
replies
2.7k
views
Error in martCheck(mart, c("ensembl", "ENSEMBL_MART_ENSEMBL")) : No dataset selected, please select a dataset first.
biomart
mart
ensembl
updated 5.0 years ago by
James W. MacDonald
68k • written 5.0 years ago by
didemdkn
• 0
0
votes
0
replies
989
views
News:
Ensembl 99 has been released and renaming of species
biomart
ensembl
e99
mart
news
News
5.2 years ago
Thomas Maurel
▴ 800
0
votes
0
replies
1.2k
views
News:
Ensembl 98 has been released and renaming of species
biomart
ensembl
e98
mart
News
5.5 years ago
Thomas Maurel
▴ 800
0
votes
4
replies
1.4k
views
retrieve vgnc gene name or vgnc gene symbol from Biomart after differential analysis
biomart
mart
getbm
updated 6.7 years ago by
James W. MacDonald
68k • written 6.7 years ago by
cagenet34
▴ 20
1
vote
0
replies
1.4k
views
News:
Ensembl release 85 is out!
ensembl
biomart
release85
ensembl release
mart
News
8.7 years ago
Thomas Maurel
▴ 800
4
votes
9
replies
3.5k
views
News:
Ensembl release 84 is out!
ensembl
mart
release84
biomart
ensembl release
News
updated 9.0 years ago by
arielpaulson
▴ 20 • written 9.1 years ago by
Thomas Maurel
▴ 800
9 results • Page
1 of 1
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Comment: DESeq2 - human data, weird results, troubleshooting
by
bd2000
▴ 30
I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…
Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin
by
James W. MacDonald
68k
The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…
Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin
by
ATpoint
★ 4.8k
> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…
Comment: Ensembl site unresponsive via biomaRt
by
darylruiz6545
• 0
Thank you so much for sharing the link.
Comment: compute_fasta_digest does not match Salmon index hash
by
Alex
• 0
I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…
Votes
Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin
Two EPIC Methylation Array Analysis Questions
How to get DMR for Infinium methylation EPIC v2
A: GEOquery Fails to Download Series Matrix File
Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species
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