Showing : mart • reset
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News: Ensembl 113 has been released
ensembl ensembldb mart biomaRt
4 months ago Ensembl_Jorge • 0
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Accessing local installation of biomart results in "Unexpected format to the list of available marts"
mart martconfigurator biomaRt xml
updated 4.2 years ago by ★ 6.6k • written 4.2 years ago by • 0
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News: Ensembl 100 has been released
biomart ensembl e100 mart news News
4.8 years ago Thomas Maurel ▴ 800
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2
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2.6k
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Error in martCheck(mart, c("ensembl", "ENSEMBL_MART_ENSEMBL")) : No dataset selected, please select a dataset first.
biomart mart ensembl
updated 4.9 years ago by 68k • written 4.9 years ago by • 0
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News: Ensembl 99 has been released and renaming of species
biomart ensembl e99 mart news News
5.1 years ago Thomas Maurel ▴ 800
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1.2k
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News: Ensembl 98 has been released and renaming of species
biomart ensembl e98 mart News
5.4 years ago Thomas Maurel ▴ 800
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4
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1.4k
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retrieve vgnc gene name or vgnc gene symbol from Biomart after differential analysis
biomart mart getbm
updated 6.6 years ago by 68k • written 6.6 years ago by ▴ 20
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News: Ensembl release 85 is out!
ensembl biomart release85 ensembl release mart News
8.6 years ago Thomas Maurel ▴ 800
4
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9
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3.5k
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News: Ensembl release 84 is out!
ensembl mart release84 biomart ensembl release News
updated 8.9 years ago by ▴ 20 • written 9.0 years ago by ▴ 800
9 results • Page 1 of 1
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Comment: DepMap data mismatch by Laurent Gatto 1.6k
It might be due to different versions. The repacked/cleaned data in the `depmap` R/Bioconductor package is old, but the latest files can al…
Comment: Conumee2 - CNV.summaryplot() by James W. MacDonald 68k
If you are using `conumee2`, then you are in the wrong place. That isn't a Bioconductor package (yet? No idea if they have/will submit it).
Answer: myvariant error by James W. MacDonald 68k
You don't show anything about the data you are annotating, so it's hard to say what the problem might be. Does the example data work for yo…
Answer: Conumee2 - CNV.summaryplot() by James W. MacDonald 68k
There doesn't appear to be a function called `CNV.summaryplot` in `conumee`. What package does that function come from?
Comment: Use of limma R package with targeted proteomics for DE analysis by svlachavas ▴ 840
Dear Gordon, thank you for returning back ! Actually the output is not "NPX"-as indeed it most frequent output for a lot of pannels-but as …
Votes
A: What is the "linear model" part used for in Limma?
Comment: Use of limma R package with targeted proteomics for DE analysis
A: Unbalanced experiment with multiple samples from each patient.
Unbalanced experiment with multiple samples from each patient.
Answer: Vertical line at A=0, nothing else, on MA plot
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