Bioconductor Log2FC

Showing : log2FC • reset

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1.7k

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fgsea log2FC

9 months ago V_Vibes • 0

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545

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DESeq2 log2FC vst()

updated 9 months ago by ATpoint ★ 4.8k • written 9 months ago by lifeonmars • 0

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973

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DESeq2 SingleCell log2FC

23 months ago paria.alipour • 0

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2.2k

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DESeq2 Log2FC RNASeqData

2.3 years ago Iwan • 0

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1.0k

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DESeq2 LRT multifactorial up/down-reg log2FC

updated 2.3 years ago by James W. MacDonald 68k • written 2.3 years ago by Laia ▴ 10

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6.2k

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DESeq2 log2FC

2.6 years ago User000 • 0

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1.8k

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log2FC DESeq2 GSEA voom limma

updated 2.7 years ago by Gordon Smyth 52k • written 2.7 years ago by Yang Shi ▴ 10

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3.3k

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edger log2FC

written 5.5 years ago by matteo.buti • 0

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1.6k

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deseq2 log2fc standard error timecourse

updated 7.2 years ago by ellascottgm • 0 • written 7.2 years ago by Verena • 0

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1.6k

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deseq2 log2fc shrinkage

updated 7.3 years ago by Michael Love 43k • written 7.3 years ago by aec ▴ 90

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6.5k

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deseq2 L2FC log2fc

updated 7.7 years ago by Michael Love 43k • written 7.7 years ago by sup230 ▴ 30

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4.3k

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deseq2 log2fc

updated 8.5 years ago by Michael Love 43k • written 8.5 years ago by David R ▴ 90

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2.4k

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deseq2 chipseq counts log2fc error

updated 8.8 years ago by Michael Love 43k • written 8.9 years ago by robin.uchiyama • 0

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7.1k

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limma pvalue log2fc log2

updated 2.4 years ago by James W. MacDonald 68k • written 9.0 years ago by serpalma.v ▴ 60

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6.4k

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deseq2 differential gene expression log2fc

9.1 years ago Osvaldo ▴ 40

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2.5k

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deseq2 R log2fc

updated 9.4 years ago by Michael Love 43k • written 9.4 years ago by Sushant Pawar • 0

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2.2k

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scan Log2FC

updated 9.7 years ago by Gordon Smyth 52k • written 9.7 years ago by Vani ▴ 20

17 results • Page 1 of 1

Recent ...

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Answer: WGCNA by ATpoint ★ 4.8k

> I would like to ask whether it would make sense to first normalize the count data using DESeq2 and VST before performing WGCNA. This …

Answer: cannot download atena annotation for human by Robert Castelo ★ 3.4k

Hi, sorry for the delay in getting back to you, probably by now you found the solution yourself, but just in case you didn't or anybody els…

Answer: Comparison of results obtained from a subset of the data versus the complete dat by swbarnes2 ★ 1.4k

In general, using the entire dataset and then just comparing the subgroups you want within the whole dataset is preferable.

Comment: Differential expression analysis using two TCGA datasets by ATpoint ★ 4.8k

If these are two different batches then they're fully confounded making it statistically invalid. Biologically, I find it at least question…

Answer: PhD scholar by ATpoint ★ 4.8k

Hi, please consider asking this at biostars.org as here we're mainly answering precise technical questions towards the packages. You are se…

Votes

Answer: Origin of the labels for the SingleCellMultiModal dataset

Answer: PhD scholar

Answer: how to use `arrayWeightsQuick()`?

Having Trouble Using CNE12() and CNE21() in CNEr

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Scholar to ATpoint ★ 4.8k