Bioconductor Log2FC

Showing : log2FC • reset

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1.4k

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fgsea log2FC

7 months ago • updated 6 months ago V_Vibes • 0

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438

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DESeq2 log2FC vst()

updated 7 months ago by ATpoint ★ 4.6k • written 7 months ago by lifeonmars • 0

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892

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DESeq2 SingleCell log2FC

21 months ago paria.alipour • 0

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2.0k

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DESeq2 Log2FC RNASeqData

2.1 years ago Iwan • 0

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952

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DESeq2 LRT multifactorial up/down-reg log2FC

updated 2.1 years ago by James W. MacDonald 67k • written 2.1 years ago by Laia ▴ 10

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5.8k

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DESeq2 log2FC

2.4 years ago User000 • 0

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1.7k

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log2FC DESeq2 GSEA voom limma

updated 2.5 years ago by Gordon Smyth 52k • written 2.5 years ago by Yang Shi ▴ 10

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2.9k

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edger log2FC

written 5.3 years ago by matteo.buti • 0

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1.6k

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deseq2 log2fc standard error timecourse

updated 7.0 years ago by ellascottgm • 0 • written 7.0 years ago by Verena • 0

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1.6k

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deseq2 log2fc shrinkage

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by aec ▴ 90

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6.2k

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deseq2 L2FC log2fc

updated 7.5 years ago by Michael Love 43k • written 7.5 years ago by sup230 ▴ 30

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4.2k

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deseq2 log2fc

updated 8.3 years ago by Michael Love 43k • written 8.3 years ago by David R ▴ 90

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2.3k

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deseq2 chipseq counts log2fc error

updated 8.7 years ago by Michael Love 43k • written 8.7 years ago by robin.uchiyama • 0

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6.7k

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limma pvalue log2fc log2

updated 2.2 years ago by James W. MacDonald 67k • written 8.8 years ago by serpalma.v ▴ 60

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6.3k

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deseq2 differential gene expression log2fc

8.9 years ago Osvaldo ▴ 40

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2.5k

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deseq2 R log2fc

updated 9.2 years ago by Michael Love 43k • written 9.2 years ago by Sushant Pawar • 0

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2.1k

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scan Log2FC

updated 9.5 years ago by Gordon Smyth 52k • written 9.6 years ago by Vani ▴ 20

17 results • Page 1 of 1

Recent ...

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Answer: Using genomicRanges / plyranges to calculate score of peaks within intervals by Michael Love 43k

This should be possible with plyranges using `join_overlap` and `group_by` on the metadata from the tile. E.g. create `tile.id` as a variab…

Answer: Reducing and aggregating GRanges with gaps using plyranges by Michael Love 43k

I added `min.gapwidth` to `reduce_ranges()` in recent plyranges releases: https://github.com/tidyomics/plyranges/pull/105

Answer: Find exact GRanges match keeping metadata columns by Michael Love 43k

You could use `minoverlap` but that requires an integer, not a fraction: ``` gr1 |> join_overlap_left(gr2, minoverlap=6) ``` Plyranges do…

Comment: Unused arguments error without used arguments in GSVA? by 1sunmic2 • 0

It was due to the comma. Thank you!

Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…

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Answer: Unused arguments error without used arguments in GSVA?

Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

Awards • All

Teacher to Axel Klenk ★ 1.1k