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R quantile list

20 months ago sat • 0

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list save dataframe

updated 2.4 years ago by shepherl 4.1k • written 2.4 years ago by orticello.1160797 ▴ 10

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TCGA tcgabiolinks list reformat

6.9 years ago Guido Hooiveld ★ 4.1k

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dnastringset list stringset

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r iranges findoverlaps IntegerList List

8.3 years ago • updated 8.0 years ago jian_liangli • 0

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coercion data manipulation s4vectors List

8.4 years ago Jurat Shahidin ▴ 80

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deseq2 heatmap clustering file list

updated 9.2 years ago by Michael Love 42k • written 9.2 years ago by chariko • 0

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org.mm.eg.db select list

updated 9.2 years ago by James W. MacDonald 67k • written 9.2 years ago by Assa Yeroslaviz ★ 1.5k

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mirror preferred list

updated 9.5 years ago by Dan Tenenbaum ★ 8.2k • written 9.5 years ago by lejeczek ▴ 10

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Piano List

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rle list irange grangeslist

updated 9.7 years ago by Chris Seidel ▴ 80 • written 9.7 years ago by gen ▴ 30

11 results • Page 1 of 1

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Answer: ANOVA like approach of edgeR by Gordon Smyth 51k

You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…

Answer: Create Illmina bead summary data by Gordon Smyth 51k

GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

OK thank you.

Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k

You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

Thank you. If I have questions about QC/normalization, do I ask them here or ask a new question?

Votes

Answer: Detecting genomic signatures of drug resistance breast cancer in transcriptom

Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (

Answer: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (

Comment: does anyone how to create rarefaction curves from a phyloseq object?

Answer: ANOVA like approach of edgeR

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