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R quantile list

2.1 years ago sat • 0

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list save dataframe

updated 2.8 years ago by shepherl 4.1k • written 2.8 years ago by orticello.1160797 ▴ 10

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TCGA tcgabiolinks list reformat

7.2 years ago Guido Hooiveld ★ 4.1k

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dnastringset list stringset

updated 7.8 years ago by Martin Morgan 25k • written 7.8 years ago by vinod.acear ▴ 50

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r iranges findoverlaps IntegerList List

8.6 years ago • updated 8.4 years ago jian_liangli • 0

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coercion data manipulation s4vectors List

8.8 years ago Jurat Shahidin ▴ 80

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deseq2 heatmap clustering file list

updated 9.5 years ago by Michael Love 43k • written 9.6 years ago by chariko • 0

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org.mm.eg.db select list

updated 9.5 years ago by James W. MacDonald 68k • written 9.5 years ago by Assa Yeroslaviz ★ 1.5k

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mirror preferred list

updated 9.9 years ago by Dan Tenenbaum ★ 8.2k • written 9.9 years ago by lejeczek ▴ 10

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Piano List

updated 10.0 years ago by Leif Väremo ▴ 70 • written 10.0 years ago by nonCodingGene ▴ 10

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rle list irange grangeslist

updated 10.0 years ago by Chris Seidel ▴ 80 • written 10.0 years ago by gen ▴ 30

11 results • Page 1 of 1

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Comment: DESeq2 - human data, weird results, troubleshooting by bd2000 ▴ 30

I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin by James W. MacDonald 68k

The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…

Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0

Thank you so much for sharing the link.

Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0

I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…

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Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin

Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

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