updated 8 months ago by
Gordon Smyth
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written 8 months ago by
roger.moreno.justicia
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Comment: Volcano plot has many values around zero
by
nramakr
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0
Thank you. Could you clarify what that says about the validity of the whole dataset? Would it still be alright to assess candidates above t…
Answer: Volcano plot has many values around zero
by
ATpoint
★
4.5k
It means you have little (no) evidence for any differential expression.
Comment: Differential Expression Analysis with unbalanced batches without replication bet
by
Thili
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0
Thank you for your reply. I currently have batch-corrected data processed with scvi-tools (specifically, totalvi) and have followed the sam…
Comment: Problem at champ.load
by
andrew.gibbons
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0
I'd love to know if anyone has a workaround too. I've tried rolling back ChAMP and R to the previous versions that others have said work wi…
Comment: GOstats kegg analysis in wheat - help - none of the objects in the first column
by
GV Yoshikawa
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0
Thank you for the reply. I tried swapping columns before asking, it made no difference.
head(keggframeData)
path_id kegg…
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