Bioconductor Lfcthreshold

Showing : lfcthreshold • reset

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1.8k

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DESeq2 lfcThreshold

2.2 years ago Abir.khazaal ▴ 10

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2.2k

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lfcshrink DESeq2 RNASeq lfcthreshold

2.3 years ago ClaudiaE • 0

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2.4k

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ashr Deseq2 lfcThreshold

updated 3.1 years ago by Michael Love 42k • written 4.5 years ago by Iryna • 0

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8.2k

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deseq2 differential expression logfoldchange lfcshrink lfcthreshold

updated 3.4 years ago by Michael Love 42k • written 6.4 years ago by emi.sch ▴ 40

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1.2k

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deseq2 lfcshrink lfcthreshold differential gene expression

updated 6.0 years ago by Michael Love 42k • written 6.0 years ago by corentinrichard374369 • 0

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2.6k

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DESeq2 lfcThreshold

updated 6.6 years ago by Michael Love 42k • written 6.6 years ago by Mike ▴ 10

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5.9k

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lfcthreshold deseq2

updated 6.9 years ago by Michael Love 42k • written 6.9 years ago by lirongrossmann ▴ 80

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3.3k

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deseq2 microrna lfcThreshold stable expression ffpe

updated 9.0 years ago by Michael Love 42k • written 9.0 years ago by mariakarand ▴ 20

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Comment: Problem at champ.load by icecreamlover • 0

Hello! Were you able to figure this out? I am running into the same error!

Comment: ChAMP - obtaining beta values using EPICv2 annotation by icecreamlover • 0

Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…

Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0

Can this please be revisited and corrected ASAP? I'm encountering the same issue, using a slightly more modern version of R (4.1.0). It s…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Thank you!

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Hi Gordon, Thanks for the answer! This makes a lot of sense. Your suggested pipeline (separate processing of datasets -> gene set analyses…

Votes

A: Up/Down Regulated GeneList from edgeR and R

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

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