Bioconductor LfcThreshold

Showing : lfcThreshold • reset

votes

replies

2.0k

views

DESeq2 lfcThreshold

2.4 years ago Abir.khazaal ▴ 10

vote

replies

2.5k

views

lfcshrink DESeq2 RNASeq lfcthreshold

2.6 years ago ClaudiaE • 0

votes

replies

2.5k

views

ashr Deseq2 lfcThreshold

updated 3.3 years ago by Michael Love 43k • written 4.8 years ago by Iryna • 0

votes

replies

8.6k

views

deseq2 differential expression logfoldchange lfcshrink lfcthreshold

updated 3.7 years ago by Michael Love 43k • written 6.6 years ago by emi.sch ▴ 40

votes

1.2k

views

deseq2 lfcshrink lfcthreshold differential gene expression

updated 6.2 years ago by Michael Love 43k • written 6.2 years ago by corentinrichard374369 • 0

vote

replies

2.6k

views

DESeq2 lfcThreshold

updated 6.9 years ago by Michael Love 43k • written 6.9 years ago by Mike ▴ 10

votes

replies

6.1k

views

lfcthreshold deseq2

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by lirongrossmann ▴ 80

votes

3.4k

views

deseq2 microrna lfcThreshold stable expression ffpe

updated 9.3 years ago by Michael Love 43k • written 9.3 years ago by mariakarand ▴ 20

8 results • Page 1 of 1

Recent ...

Replies

Comment: Unused arguments error without used arguments in GSVA? by 1sunmic2 • 0

It was due to the comma. Thank you!

Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…

Answer: Restricting differential binding analysis to only TSS-proximal regions by Aaron Lun ★ 28k

Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…

Comment: Sample-specific methylation values using QSEA by User3088 • 0

Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…

Comment: input for singR function by iamin053 • 0

Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!

Votes

Answer: Unused arguments error without used arguments in GSVA?

Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

Awards • All

Teacher to Axel Klenk ★ 1.1k