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karyoploteR
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629
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Make custom Txdb class objects from Txdb
GenomicFeatures
karyoploteR
TxDb.Hsapiens.UCSC.hg19.knownGene
18 months ago
Shreyash
▴ 10
9
votes
5
replies
1.8k
views
karyoploteR genome coverage plotting using BSgenome.TAIR10
BSgenome.Athaliana.TAIR.TAIR10.
karyoploteR
BSgenome
updated 2.1 years ago by
James W. MacDonald
67k • written 2.1 years ago by
rtt100
• 0
0
votes
1
reply
988
views
KaryoploteR: error using galGal6 genome
KaryoploteR
updated 4.2 years ago by
Kevin Blighe
★ 4.0k • written 4.2 years ago by
mpigozzi
• 0
4
votes
5
replies
3.4k
views
How to add a color legend to plotKaryotype and kpPlotRegions ?
karyoploter
updated 5.2 years ago by
bernatgel
▴ 150 • written 5.2 years ago by
Aditya
▴ 160
0
votes
1
reply
1.1k
views
Bioconductor - Karyoploter | Visualization | Multiple Chromosome display issue
karyoploteR
updated 5.6 years ago by
bernatgel
▴ 150 • written 5.6 years ago by
saeed Ur Rehman
• 0
0
votes
1
reply
2.1k
views
How to name the custom genome in karyoploteR ?
software error
R
bsgenome
karyoploter
updated 7.0 years ago by
bernatgel
▴ 150 • written 7.0 years ago by
kirannbishwa01
▴ 20
1
vote
2
replies
1.4k
views
KaryoploteR does not work on R.3.3.3
karyoploter
updated 7.1 years ago by
bgel
▴ 10 • written 7.1 years ago by
spr
▴ 10
0
votes
0
replies
1.0k
views
karyoploteR: custom genome axis $latest.plot
KaryoploteR
7.3 years ago
Radek
▴ 90
8 results • Page
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Recent ...
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Comment: BiomaRt Possible Ensembl SSL connectivity problems detected.
by
Adam
• 0
I just found this workaround: httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE)) at [this Stack Overflow link][…
Comment: Problem at champ.load
by
icecreamlover
• 0
Hello! Were you able to figure this out? I am running into the same error!
Comment: ChAMP - obtaining beta values using EPICv2 annotation
by
icecreamlover
• 0
Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…
Comment: BiomaRt Possible Ensembl SSL connectivity problems detected.
by
Adam
• 0
Can this please be revisited and corrected ASAP? I'm encountering the same issue, using a slightly more modern version of R (4.1.0). It s…
Comment: Combining RNAseq and microarray data using edgeR/limma-voom
by
Adam Marstrand
• 0
Thank you!
Votes
A: Up/Down Regulated GeneList from edgeR and R
A: Up/Down Regulated GeneList from edgeR and R
A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis
Answer: Combining RNAseq and microarray data using edgeR/limma-voom
Answer: How do I merge a list of GRanges?
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