Bioconductor K-fold

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glmnet cox LOOCV k-fold cross validation

updated 5.6 years ago by chris86 ▴ 420 • written 5.6 years ago by Talip ▴ 10

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Comment: BiocParallel_1.40.1.tar.gz not available by Johan • 0

Your approach works, but it implies manually rejecting the update of BiocParallel at each use of `BiocManager::install()`, which is pretty …

Comment: BiocParallel_1.40.1.tar.gz not available by shepherl 4.1k

Thank you for your question. We are aware of the issue and are in process of resolving.

Comment: BiocParallel_1.40.1.tar.gz not available by Mike Smith ★ 6.6k

I'm not sure why the source package isn't currently available, but when you get the to question `Old packages: 'BiocParallel' Update all/so…

Answer: DNAStringSet(x, start=, end=) loses quality information by stenlana035 • 0

Perhaps the hub genes are associated with other variables that have a negative correlation with the immune score rather than the immunologi…

Answer: Model performance for spline modelling of RNA-seq timecourses in edgeR by Gordon Smyth 52k

I don't understand your question, because there is no difference between limma or glmFit or glmQLFit in terms of spline modeling or the tes…

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Comment: BiocParallel_1.40.1.tar.gz not available

Limma outputs different results for same sample?

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