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intron
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intron
BSgenome.Hsapiens.UCSC.hg38
BSgenome
updated 22 months ago by
ATpoint
★ 4.8k • written 22 months ago by
Lillian
• 0
0
votes
1
reply
899
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using deseq2 for intronic counts for 2 conditins with replicates
deseq2
intron
differential expression
updated 5.1 years ago by
Michael Love
43k • written 5.1 years ago by
gv
▴ 40
0
votes
1
reply
2.1k
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Counting exonic and intronic reads for differential gene expression
deseq2
intron
updated 6.6 years ago by
Malcolm Cook
★ 1.6k • written 6.6 years ago by
Mthabisi Moyo
▴ 40
2
votes
2
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2.3k
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Intron length per transcript using GenomicFeatures
intron
GenomicFeatures
updated 7.4 years ago by
Michael Lawrence
★ 11k • written 7.4 years ago by
leonardsquall15
▴ 10
4 results • Page
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Answer: Design formula for circadian time-course data for vst() function
by
ATpoint
★ 4.8k
This was asked before: https://support.bioconductor.org/p/9148734/#9148812 Take-home message is that influence is minor, as you see your…
Comment: Filtering after DESeq
by
caroline.zanchi
• 0
... I did it. It does filter out quite a bit of genes : ``` keep <- filterByExpr(dds, group="host_treatment_generation",min.count = 10, mi…
Comment: Module membership vs gene significance result and Modules-trait relationships re
by
Vinaya
• 0
Hi. I am having the same issue, and haven't found a solution still.
Comment: Feature Counts - potential bug with outfile.jcounts
by
Tom
• 0
[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…
Comment: Filtering after DESeq
by
caroline.zanchi
• 0
I am going to try this right now, thanks !
Votes
Answer: CluserProfiler message "No gene can be mapped"
A: Minfi issue: return code from pthread_create() is 22
Comment: Filtering after DESeq
Answer: DiffBind; Error: No sites have activity greater than filter value
DiffBind; Error: No sites have activity greater than filter value
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