Bioconductor Intersect

Showing : intersect • reset

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581

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genomicrange intersect

updated 4.3 years ago by James W. MacDonald 66k • written 4.3 years ago by AZ ▴ 30

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935

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GenomicRanges overlaps intersect

updated 5.3 years ago by Michael Lawrence ★ 11k • written 5.3 years ago by fjia304 • 0

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granges bedtools intersect

updated 5.9 years ago by lee.s ▴ 70 • written 5.9 years ago by Bogdan ▴ 670

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genomicranges overlap intersect findoverlaps

6.5 years ago Caroline Grisbach Meissner ▴ 10

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929

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intersect grangeslist galignment

updated 7.1 years ago by Hervé Pagès 16k • written 7.1 years ago by ccanchaya • 0

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genomicranges findoverlaps intersect

updated 7.9 years ago by Steve Lianoglou ★ 13k • written 7.9 years ago by rubi ▴ 110

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genomicranges intersect

updated 8.1 years ago by shepherl 3.9k • written 8.1 years ago by zlskidmore ▴ 30

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granges intersect

8.3 years ago Jurat Shahidin ▴ 80

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iranges findoverlaps intersect group

8.6 years ago pesquivel • 0

9 results • Page 1 of 1

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Comment: Ranking the GSEA Results by Lluís Revilla Sancho ▴ 730

You can have the ranking without the cutoff. If you don't keep any gene set after the cutoff then there is nothing to rank as you said, so…

Answer: Create a Graph w/ Only the Genes Interaction by Antonio • 0

Thank you all, I solved my issue by creating a for loop. Cheers!

Comment: Ranking the GSEA Results by alserg ▴ 270

Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself

Comment: Ranking the GSEA Results by alserg ▴ 270

Where did you see ranking of genes by `log2FC * (-log10 p-value)`? I don't think I ever saw one and not sure what it should achieve. Aren't…

Comment: Trouble Installing DADA2 (warning: R new user) by shepherl 3.9k

As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…

Votes

Comment: Ranking the GSEA Results

Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)

ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features

Comment: How to get the DMR?

Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it

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Popular Question to mohammedtoufiq91 ▴ 10