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Job:
Research Associate, computational/statistical genetics & genomics, MRC Biostatistics Unit, University of Cambridge
molecularQTL
computationalbiology
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GWAS
biostatistics
3.1 years ago
helene.ruffieux
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Job: Moderna Statistical genomics co-op 2022, single-cell applications in immunology, masters or PhDs
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3.6 years ago
joyce.hsiao1
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Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
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3.6 years ago
Daniel
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Using DESeq2 for T-cell receptor clonotypes
deseq2
immunology
tcr
clonotypes
updated 6.7 years ago by
Michael Love
43k • written 6.7 years ago by
jirkanov
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Job:
Postdoctoral position, T follicular helper cell transcriptomics
single cell
rnaseq
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immunology
Job
6.8 years ago
michela.locci
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Job:
Bioinformatician - The Ragon Institute of MGH, MIT and Harvard
bioinformatician job
bioinformatics
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HIV
Job
8.4 years ago • updated 8.1 years ago
Ragon Institute of MGH, MIT and Harvard
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News:
Exploiting computational immunology to understand the immune system| Symposium
computational biology
immunology
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RIMLS
News
updated 8.3 years ago by
Maxim.Baranov
• 0 • written 8.4 years ago by
maximbaranov23
• 0
7 results • Page
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Comment: Controlling for batch and estrus cycle using DESeq2 in RNA-seq analysis
by
donnycrimson
• 0
One potential workaround might be to adjust for these factors using a combination of design matrices perhaps including batch as a covariate…
Comment: DESeq2 Design controlling for gender
by
donnycrimson
• 0
On a lighter note, while you are tackling such complex data, you might enjoy a quick break playing the [Slope Game](https://slopegame.lol)…
Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list'
by
donnycrimson
• 0
Have you considered streamlining how you handle data input to mitigate these issues. It might help to define the parameters more strictly …
Comment: CluserProfiler message "No gene can be mapped"
by
Carolina
• 0
There is, the overlap that reads out is ( Genes in common: 368 of 368 ). Here is the link for [background genes][1], [term2gene][2], [term2…
Comment: Differing results with DESeq2
by
JKim
• 0
My two cents. I think it would be more straightforward if you use cellmeans model. Have a look at [A guide to creating design matrices for …
Votes
remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
How to remove X & Y chromosome genes from RNAseq data
Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?
A: Unbalanced experiment with multiple samples from each patient.
A: Understanding contrasts limma
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