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hub genes
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6
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2.9k
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WGCNA with distance matrix only from newick data.
WGCNA
eigengene
hub genes
7.5 years ago
yifangt
▴ 20
3
votes
2
replies
2.9k
views
Finding nearest neighbors of given hub gene in a co-expression network module
wgcna
rbgl
graph
coexpression
hub genes
updated 9.1 years ago by
Peter Langfelder
★ 3.0k • written 9.1 years ago by
Alan Smith
▴ 150
0
votes
1
reply
2.8k
views
question on visANT after WGCNA
wgcna
visant
module
hub genes
updated 9.1 years ago by
etycksen
• 0 • written 9.2 years ago by
agattorosso
• 0
14
votes
4
replies
16k
views
WGCNA Hub Gene Selection Method
WGCNA
Hub Genes
KmE
Intramodular Connectivity
updated 9.8 years ago by
Peter Langfelder
★ 3.0k • written 9.8 years ago by
brohawndg
▴ 150
4 results • Page
1 of 1
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Comment: Module membership vs gene significance result and Modules-trait relationships re
by
Vinaya
• 0
Hi. I am having the same issue, and haven't found a solution still.
Comment: Feature Counts - potential bug with outfile.jcounts
by
Tom
• 0
[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…
Comment: Filtering after DESeq
by
caroline.zanchi
• 0
I am going to try this right now, thanks !
Comment: Bioconductor 3.20 Release Schedule
by
randyprice13102000
• 0
This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/
Comment: Filtering after DESeq
by
ATpoint
★ 4.8k
The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …
Votes
A: Minfi issue: return code from pthread_create() is 22
Comment: Filtering after DESeq
Answer: DiffBind; Error: No sites have activity greater than filter value
DiffBind; Error: No sites have activity greater than filter value
remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
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