Showing : hopach • reset
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Hopach: distancematrix and distancevector do not return identical results
documentation bug hopach euclidean distance
2.9 years ago txema.heredia • 0
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HOPACH error: "negative length vectors are not allowed" in distancematrix(). Matrix too large?
hopach
updated 9.8 years ago by ▴ 110 • written 9.8 years ago by • 0
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hopach generates a wrong output
hopach
10.1 years ago • updated 10.0 years ago Alogmail2@aol.com ▴ 90
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displaying clustering results in TreeView or MapleTree
Microarray Clustering Kidney Ovarian probe hopach Microarray Clustering Kidney Ovarian
13.0 years ago Mark Baumeister ▴ 40
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CRAN packages maintained by you
hexbin gpls RBGL impute Icens hopach maanova RLMM CORREP cycle hexbin gpls RBGL Icens
updated 13.2 years ago by ▴ 430 • written 13.2 years ago by ▴ 10
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13
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2.6k
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Bioconductor Digest, Vol 87, Issue 10
Clustering hopach Clustering hopach
updated 14.7 years ago by ▴ 160 • written 14.7 years ago by ▴ 130
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Problem with Hopach: "Error in dmat[ord, ]"
drosophila2 hopach drosophila2 hopach
15.3 years ago Samuel GRANJEAUD - IR/ICIM ▴ 60
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Problem with Hopach: "Error in dmat[ord, ]"
drosophila2 hopach drosophila2 hopach
15.6 years ago Paolo Innocenti ▴ 320
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Problem with Hopach: "Error in dmat[ord, ]"
drosophila2 hopach drosophila2 hopach
updated 15.7 years ago by 6.7k • written 15.7 years ago by ▴ 320
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Hopach cluster quality metrics
hopach hopach
16.2 years ago Khan, Anar ▴ 30
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HOPACH and .cdt which doesn't work with javatreeview
Clustering hopach Clustering hopach
16.4 years ago Sébastien Tourlet ▴ 20
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1.2k
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HOPACH clustering of genes
Clustering hopach Clustering hopach
updated 16.5 years ago by ▴ 20 • written 16.5 years ago by ▴ 100
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Why makeoutput() function is not included in hopach 1.4.3 version
Microarray Clustering hopach Microarray Clustering hopach
16.6 years ago Suprabhath Reddy ▴ 10
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1.1k
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How to extract Hopach MSS value
Clustering hopach Clustering hopach
updated 17.0 years ago by 6.7k • written 17.0 years ago by ▴ 20
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1
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3.0k
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ReadAffy can not find function read.AnnotatedDataFrame
Biobase genefilter affydata limma simpleaffy hopach affyio Biobase genefilter affydata
updated 18.1 years ago by 67k • written 18.1 years ago by ▴ 510
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hopach and heatmap
Clustering hopach Clustering hopach
18.6 years ago Ivan Baxter ▴ 60
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About Hopach package
hopach hopach
19.3 years ago kpollard ▴ 110
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About Hopach package
Clustering hopach Clustering hopach
19.4 years ago z3076426@student.unsw.edu.au ▴ 10
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How to use distance functions from hopach package in a heatmap?
hopach hopach
19.5 years ago kpollard ▴ 110
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1
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1.1k
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R terminated when i try HOPACH in a loop,why?
hopach hopach
updated 19.7 years ago by ★ 7.4k • written 19.7 years ago by ▴ 90
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(no subject)
hopach hopach
19.8 years ago kpollard ▴ 110
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998
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[BioC}: export Hopoah to treeview
hopach hopach
19.8 years ago Anthony Bosco ▴ 500
22 results • Page 1 of 1
Recent ...
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Comment: iam not able to do retrive data using GEOquery R package by James W. MacDonald 67k
Another alternative is to use the `GEOmetadb` package ([vignette here)][1], which will allow you to make queries to identify GEO datasets t…
Answer: iam not able to do retrive data using GEOquery R package by James W. MacDonald 67k
Before you try to use a function, you should read the help page to ensure that you are using the correct argument type. As an example, here…
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu by James W. MacDonald 67k
It's not the version control in R/Bioconductor though. It's the version of the genome. OP used Ensembl build 113 to align and then noted th…
Comment: Why did PCA plots look exactly the same after adjusting for batch covariate in D by Quang ▴ 10
Also, Michael, when I used SVA in addition, so I have the `design = ~ Date_lysed + SV1 + condition_subset`, do I just set `mat_corrected <-…
Comment: Differential variability modelling with vst() expression by Michael Love 43k
See Gordon's reply below for an implementation you can use directly.
Votes
Answer: Issue carrying out DiffBind Analysis at a predefined peak set
Answer: Differential variability modelling with vst() expression
Answer: Differential variability modelling with vst() expression
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Answer: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
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