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hopach
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0
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0
replies
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Hopach: distancematrix and distancevector do not return identical results
documentation
bug
hopach
euclidean
distance
3.0 years ago
txema.heredia
• 0
1
vote
5
replies
6.1k
views
HOPACH error: "negative length vectors are not allowed" in distancematrix(). Matrix too large?
hopach
updated 9.8 years ago by
kpollard
▴ 110 • written 9.9 years ago by
ejliaw
• 0
0
votes
3
replies
1.3k
views
hopach generates a wrong output
hopach
10.2 years ago • updated 10.1 years ago
Alogmail2@aol.com
▴ 90
0
votes
0
replies
1.6k
views
displaying clustering results in TreeView or MapleTree
Microarray
Clustering
Kidney
Ovarian
probe
hopach
Microarray
Clustering
Kidney
Ovarian
13.1 years ago
Mark Baumeister
▴ 40
0
votes
1
reply
1.5k
views
CRAN packages maintained by you
hexbin
gpls
RBGL
impute
Icens
hopach
maanova
RLMM
CORREP
cycle
hexbin
gpls
RBGL
Icens
updated 13.3 years ago by
Nicholas Lewin-Koh
▴ 430 • written 13.3 years ago by
Kurt Hornik
▴ 10
0
votes
13
replies
2.6k
views
Bioconductor Digest, Vol 87, Issue 10
Clustering
hopach
Clustering
hopach
updated 14.7 years ago by
Richard Pearson
▴ 160 • written 14.8 years ago by
avinash gupta
▴ 130
0
votes
0
replies
1.2k
views
Problem with Hopach: "Error in dmat[ord, ]"
drosophila2
hopach
drosophila2
hopach
15.4 years ago
Samuel GRANJEAUD - IR/ICIM
▴ 60
0
votes
0
replies
1.1k
views
Problem with Hopach: "Error in dmat[ord, ]"
drosophila2
hopach
drosophila2
hopach
15.7 years ago
Paolo Innocenti
▴ 320
0
votes
2
replies
1.4k
views
Problem with Hopach: "Error in dmat[ord, ]"
drosophila2
hopach
drosophila2
hopach
updated 15.7 years ago by
Vincent J. Carey, Jr.
6.7k • written 15.7 years ago by
Paolo Innocenti
▴ 320
0
votes
0
replies
966
views
Hopach cluster quality metrics
hopach
hopach
16.3 years ago
Khan, Anar
▴ 30
0
votes
0
replies
1.0k
views
HOPACH and .cdt which doesn't work with javatreeview
Clustering
hopach
Clustering
hopach
16.4 years ago
Sébastien Tourlet
▴ 20
0
votes
1
reply
1.2k
views
HOPACH clustering of genes
Clustering
hopach
Clustering
hopach
updated 16.6 years ago by
Shannon, William
▴ 20 • written 16.6 years ago by
Nathan Harmston
▴ 100
0
votes
0
replies
894
views
Why makeoutput() function is not included in hopach 1.4.3 version
Microarray
Clustering
hopach
Microarray
Clustering
hopach
16.7 years ago
Suprabhath Reddy
▴ 10
0
votes
1
reply
1.1k
views
How to extract Hopach MSS value
Clustering
hopach
Clustering
hopach
updated 17.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 17.0 years ago by
Prateek Singh
▴ 20
0
votes
1
reply
3.0k
views
ReadAffy can not find function read.AnnotatedDataFrame
Biobase
genefilter
affydata
limma
simpleaffy
hopach
affyio
Biobase
genefilter
affydata
updated 18.2 years ago by
James W. MacDonald
68k • written 18.2 years ago by
Georg Otto
▴ 510
0
votes
0
replies
1.1k
views
hopach and heatmap
Clustering
hopach
Clustering
hopach
18.7 years ago
Ivan Baxter
▴ 60
0
votes
0
replies
1.0k
views
About Hopach package
hopach
hopach
19.4 years ago
kpollard
▴ 110
0
votes
0
replies
937
views
About Hopach package
Clustering
hopach
Clustering
hopach
19.5 years ago
z3076426@student.unsw.edu.au
▴ 10
0
votes
0
replies
1.1k
views
How to use distance functions from hopach package in a heatmap?
hopach
hopach
19.6 years ago
kpollard
▴ 110
0
votes
1
reply
1.1k
views
R terminated when i try HOPACH in a loop,why?
hopach
hopach
updated 19.8 years ago by
Seth Falcon
★ 7.4k • written 19.8 years ago by
Xiao Shi
▴ 90
0
votes
0
replies
1.0k
views
(no subject)
hopach
hopach
19.9 years ago
kpollard
▴ 110
0
votes
0
replies
1.0k
views
[BioC}: export Hopoah to treeview
hopach
hopach
19.9 years ago
Anthony Bosco
▴ 500
22 results • Page
1 of 1
Recent ...
Replies
Comment: GSVA on RNAseq data
by
Bob
▴ 10
Hi Robert, We were actually very interested in this problem in particular. It seems that using counts for gene sets with varying gene leng…
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by
Michael Love
43k
But I will say if you are doing a lot of these, and require exact match, just making it a simple key -- eg `paste0(start,".",end)` -- seems…
Answer: Comparing Mock vs Infected in WT and Knockout Cells
by
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43k
I recommend for questions about statistical analysis plan to meet with a local statistician or someone familiar with linear models in R. I …
Answer: In WGCNA, what networkType should be used in pickSoftThreshold for a Signed Nowi
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WGCNA is no Bioconductor package. Consider biostars.org or bioinformatics Reddit, but if you do show a bit more effort please. People appre…
Answer: Error: lexical error: invalid char in json text (alevin-seurat)
by
ATpoint
★ 4.6k
Two things: 1) See https://bioconductor.org/packages/release/bioc/vignettes/tximport/inst/doc/tximport.html#Alevin -- Your `colon_file`…
Votes
A: how to extract Granges not overlapping with other ganges?
DESeq2 1.20.0 lfcshrink function
A: LIMMA on RT-PCR data
Answer: Efficiently working with HDF5-backed SingleCellExperiments
Efficiently working with HDF5-backed SingleCellExperiments
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ruwaa.ibrahem
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ramiro.barrantes
▴ 10
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Vincent J. Carey, Jr.
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52k
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