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hopach
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0
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0
replies
642
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Hopach: distancematrix and distancevector do not return identical results
documentation
bug
hopach
euclidean
distance
2.6 years ago
txema.heredia
• 0
1
vote
5
replies
5.9k
views
HOPACH error: "negative length vectors are not allowed" in distancematrix(). Matrix too large?
hopach
updated 9.5 years ago by
kpollard
▴ 110 • written 9.5 years ago by
ejliaw
• 0
0
votes
3
replies
1.2k
views
hopach generates a wrong output
hopach
9.8 years ago
Alogmail2@aol.com
▴ 90
0
votes
0
replies
1.6k
views
displaying clustering results in TreeView or MapleTree
Microarray
Clustering
Kidney
Ovarian
probe
hopach
Microarray
Clustering
Kidney
Ovarian
12.7 years ago
Mark Baumeister
▴ 40
0
votes
1
reply
1.5k
views
CRAN packages maintained by you
hexbin
gpls
RBGL
impute
Icens
hopach
maanova
RLMM
CORREP
cycle
hexbin
gpls
RBGL
Icens
updated 12.9 years ago by
Nicholas Lewin-Koh
▴ 430 • written 12.9 years ago by
Kurt Hornik
▴ 10
0
votes
13
replies
2.5k
views
Bioconductor Digest, Vol 87, Issue 10
Clustering
hopach
Clustering
hopach
updated 14.4 years ago by
Richard Pearson
▴ 160 • written 14.4 years ago by
avinash gupta
▴ 130
0
votes
0
replies
1.1k
views
Problem with Hopach: "Error in dmat[ord, ]"
drosophila2
hopach
drosophila2
hopach
15.0 years ago
Samuel GRANJEAUD - IR/ICIM
▴ 60
0
votes
0
replies
1.1k
views
Problem with Hopach: "Error in dmat[ord, ]"
drosophila2
hopach
drosophila2
hopach
15.3 years ago
Paolo Innocenti
▴ 320
0
votes
2
replies
1.4k
views
Problem with Hopach: "Error in dmat[ord, ]"
drosophila2
hopach
drosophila2
hopach
updated 15.4 years ago by
Vincent J. Carey, Jr.
6.7k • written 15.4 years ago by
Paolo Innocenti
▴ 320
0
votes
0
replies
915
views
Hopach cluster quality metrics
hopach
hopach
16.0 years ago
Khan, Anar
▴ 30
0
votes
0
replies
986
views
HOPACH and .cdt which doesn't work with javatreeview
Clustering
hopach
Clustering
hopach
16.1 years ago
Sébastien Tourlet
▴ 20
0
votes
1
reply
1.2k
views
HOPACH clustering of genes
Clustering
hopach
Clustering
hopach
updated 16.2 years ago by
Shannon, William
▴ 20 • written 16.2 years ago by
Nathan Harmston
▴ 100
0
votes
0
replies
842
views
Why makeoutput() function is not included in hopach 1.4.3 version
Microarray
Clustering
hopach
Microarray
Clustering
hopach
16.3 years ago
Suprabhath Reddy
▴ 10
0
votes
1
reply
1.1k
views
How to extract Hopach MSS value
Clustering
hopach
Clustering
hopach
updated 16.7 years ago by
Vincent J. Carey, Jr.
6.7k • written 16.7 years ago by
Prateek Singh
▴ 20
0
votes
1
reply
2.9k
views
ReadAffy can not find function read.AnnotatedDataFrame
Biobase
genefilter
affydata
limma
simpleaffy
hopach
affyio
Biobase
genefilter
affydata
updated 17.9 years ago by
James W. MacDonald
67k • written 17.9 years ago by
Georg Otto
▴ 510
0
votes
0
replies
1.0k
views
hopach and heatmap
Clustering
hopach
Clustering
hopach
18.3 years ago
Ivan Baxter
▴ 60
0
votes
0
replies
969
views
About Hopach package
hopach
hopach
19.1 years ago
kpollard
▴ 110
0
votes
0
replies
861
views
About Hopach package
Clustering
hopach
Clustering
hopach
19.1 years ago
z3076426@student.unsw.edu.au
▴ 10
0
votes
0
replies
1.0k
views
How to use distance functions from hopach package in a heatmap?
hopach
hopach
19.3 years ago
kpollard
▴ 110
0
votes
1
reply
1.0k
views
R terminated when i try HOPACH in a loop,why?
hopach
hopach
updated 19.4 years ago by
Seth Falcon
★ 7.4k • written 19.4 years ago by
Xiao Shi
▴ 90
0
votes
0
replies
967
views
(no subject)
hopach
hopach
19.6 years ago
kpollard
▴ 110
0
votes
0
replies
952
views
[BioC}: export Hopoah to treeview
hopach
hopach
19.6 years ago
Anthony Bosco
▴ 500
22 results • Page
1 of 1
Recent ...
Replies
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 20
Hi Maria, so what is the code you are using? By the 3rd way to conduct the analysis do you mean looking at the interaction model from part …
Comment: miRTarRnaseq library
by
María Calvo
• 0
Hello, in line with the previous questions, when the miRNA-mRNA interaction analysis is performed (3 rd way to conduct the analysis), I obt…
Answer: heatmap with batch effect
by
James W. MacDonald
67k
You have only one condition in the second batch, so it's not possible to remove the batch effect. You can probably adjust for it somewhat, …
Answer: how do I convert an Ilumn IDREF to a CPG loci
by
James W. MacDonald
67k
``` > library(IlluminaHumanMethylationEPICanno.ilm10b4.hg19) > Locations DataFrame with 865859 rows and 3 columns ch…
Answer: Which input data is acceptable for MAST?
by
Andrew_McDavid
▴ 270
Not too familiar with SCT v2. If it also has a point-mass at zero and the non-zero component is roughly-symmetric, then it might work ok w…
Votes
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Comment: Convert HGVS Representation back to Reference Genome Coordinates
Answer: How to control batch effect if Group and batch are same?
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Andrew_McDavid
▴ 270
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Ryan C. Thompson
★ 7.9k
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Basti
▴ 780
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Gordon Smyth
51k
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shepherl
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