Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
hisat2
•
reset
1
vote
1
reply
848
views
HISAT2 mapping
hisat2
results
updated 20 months ago by
ATpoint
★ 4.5k • written 20 months ago by
ali
• 0
0
votes
0
replies
1.6k
views
HISAT2/StringTie/Ballgown for Novel Transcript Isoform Differential Expression
isoform
RNA-seq
hisat2
stringtie
ballgown
4.1 years ago
ra711
• 0
0
votes
0
replies
2.1k
views
RNA-seq with hisat2+stringtie+ballgown
hisat2
stringtie
ballgown
RNAseq
6.8 years ago • updated 6.5 years ago
Nancy
▴ 10
1
vote
1
reply
1.6k
views
RNA-seq for DGE
stringtie
illumina
hisat2
ballgown
updated 7.0 years ago by
k.vitting.seerup
▴ 120 • written 7.0 years ago by
amy16
• 0
0
votes
1
reply
1.2k
views
Reference annotation file contains only transcript and CDS information, how to analyze the different expression of genes?
transcription
hisat2
7.0 years ago
zoukai3412085
• 0
4
votes
5
replies
6.4k
views
Hisat2 vs featureCounts summary statistics
featurecounts
hisat2
rna-seq
mapping
updated 8.5 years ago by
Wei Shi
★ 3.6k • written 8.6 years ago by
Koen Van den Berge
▴ 180
6 results • Page
1 of 1
Recent ...
Replies
Comment: Differene between the Wald and LRT test for time-series gene expression data
by
Denise
• 0
This makes a lot of sense, thank you very much!
Comment: Downloading Metagenomic Data with Higher Taxonomic Units
by
elozanoe
• 0
Hi! I'm facing the same problem. Is there any easy way to output relative abundances of higher taxonomic units (up to kingdom), similar to…
Comment: Is it recommended to analyze different tissues together when using edgeR
by
Gordon Smyth
51k
Just plot the samples with plotMDS(). Alternatively you would use `voomLmFit()` with `sample.weights=TRUE` or `var.group=tissue`. In princ…
Comment: Handling Epic Array Data
by
Melisa Tecik
• 0
Thanks a lot for the help. You saved my day
Answer: Differene between the Wald and LRT test for time-series gene expression data
by
James W. MacDonald
67k
The advantage to using the LRT is that it's an omnibus test that tells you if there are changes at any time point. If you have lots of time…
Votes
A: correcting the batch effects in Limma and SVA
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
Answer: Differene between the Wald and LRT test for time-series gene expression data
Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
Awards
• All
Popular Question
to
Talip Zengin
▴ 10
Popular Question
to
Fred Hutch (Recruiting)
▴ 40
Scholar
to
Gordon Smyth
51k
Popular Question
to
chase.mateusiak
• 0
Scholar
to
James W. MacDonald
67k
Locations
• All
Chile,
27 minutes ago
Mugla, Turkiye,
38 minutes ago
United States,
44 minutes ago
France,
53 minutes ago
Spain,
1 hour ago
Traffic: 799 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6