Bioconductor Hilbertvis

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HilbertVis ChIPseqR

updated 10 weeks ago by James W. MacDonald 67k • written 10 weeks ago by chase.mateusiak • 0

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hilbertvis rsamtools shortread biostrings

updated 8.7 years ago by Martin Morgan 25k • written 8.7 years ago by travis.m.couture • 0

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HilbertVis HilbertVis

updated 15.7 years ago by Simon Anders ▴ 150 • written 15.7 years ago by Tobias Straub ▴ 430

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Comment: build samplesheet and plot profile by yf • 0

![enter image description here][1] [1]: /media/images/8ea93bd0-bc90-443d-a332-4701f54a

Answer: I am having issues with bowtie2_build by James W. MacDonald 67k

Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…

Answer: DEG analysis across multiple timepoints, treatments and tissues by Michael Love 43k

Yes, if you think the entire time course can be modified by tissue effects then you would include another set of interaction terms. I re…

Comment: How to visualize these pathways using pathview by Guido Hooiveld ★ 4.1k

FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…

Comment: Why select top highly expressed genes based on normalized counts, but then plot by Quang NN ▴ 10

I see. Thank you ATpoint!

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Answer: Unable to install nloptr

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