Bioconductor Hdf5

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hdf5 h5 rhdf5

updated 2.5 years ago by Mike Smith ★ 6.6k • written 2.5 years ago by dNand • 0

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software error tximport hdf5

updated 5.1 years ago by Michael Love 43k • written 5.1 years ago by me5537 ▴ 10

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rhdf5 hdf5

updated 6.5 years ago by Mike Smith ★ 6.6k • written 6.5 years ago by channsoden • 0

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rhdf5 hdf5

updated 6.9 years ago by Mike Smith ★ 6.6k • written 6.9 years ago by felicien.meunier ▴ 40

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rhdf5 hdf5

updated 7.4 years ago by Mike Smith ★ 6.6k • written 7.6 years ago by Kipper Fletez-Brant ▴ 150

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deseq2 hdf5 rangedsummarizedexperiment rnaseq

7.4 years ago Jakob Petereit • 0

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rhdf5 r hdf5

updated 20 months ago by Yijing • 0 • written 7.5 years ago by him4u324 ▴ 10

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hdf5 DelayedArray summarizedexperiment Tutorial

7.9 years ago Vincent J. Carey, Jr. 6.7k

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biom json hdf5 qiime phyloseq

updated 8.1 years ago by Bernd Fischer ▴ 550 • written 8.2 years ago by newmanss • 0

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rhdf5 hdf5 dependencies

updated 8.5 years ago by Mike Smith ★ 6.6k • written 8.5 years ago by thabermann • 0

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hdf5 rhdf5 hdf

updated 8.8 years ago by Bernd Fischer ▴ 550 • written 8.8 years ago by manfredodiporcia • 0

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rhdf5 hdf5

9.2 years ago trombe.piju • 0

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installation dependency library hdf5

9.3 years ago Ulrik Stervbo ▴ 30

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rhdf5 hdf5

updated 9.5 years ago by Nathaniel Hayden ▴ 180 • written 9.5 years ago by serefarikan • 0

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rhdf5 hdf5

updated 9.5 years ago by Bernd Fischer ▴ 550 • written 9.5 years ago by Mike Smith ★ 6.6k

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rhdf5 hdf5

updated 10.0 years ago by Bernd Fischer ▴ 550 • written 10.0 years ago by Nathaniel Hayden ▴ 180

16 results • Page 1 of 1

Recent ...

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Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40

Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …

Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k

limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k

Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…

Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60

Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k

For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…

Votes

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

C: edgeR and lack of counts ID on CPM matrix

A: DESeq2 Following RSEM

A: importing RSEM data into DESeq2

A: Expected counts from RSEM in DESeq2

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