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hapmap
•
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0
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0
replies
846
views
Do you know a sofware to draw pedigrees + haplotypes?
SequencingData
STR
MutationalPatterns
pedigree
HapMap
3.5 years ago
Negar
• 0
0
votes
0
replies
967
views
Access HapMap from biomart
hapmap
9.1 years ago
jaganmutyala
• 0
2
votes
3
replies
5.6k
views
Linkage disequilibrium with 1000 Genomes/HapMap
HapMap
genomes
HapMap
genomes
10.6 years ago
enricoferrero
▴ 680
0
votes
2
replies
2.4k
views
ensemblVEP, variant_effect_predictor versions and release schedule
Transcription
HapMap
PolyPhen
SIFT
convert
genomes
ensemblVEP
Transcription
HapMap
SIFT
updated 11.1 years ago by
Valerie Obenchain
★ 6.8k • written 11.1 years ago by
Thomas Sandmann
▴ 30
0
votes
0
replies
1.2k
views
Problem in reading SNP hapmap data
SNP
HapMap
SNP
HapMap
11.4 years ago
Xiaolian Yuan
▴ 30
0
votes
1
reply
1.7k
views
DiffBind & Chip-exo
HapMap
HapMap
11.6 years ago
Rory Stark
★ 5.2k
0
votes
0
replies
1.6k
views
the set of SNPs difference between Genome build 37.1 and 37.3
SNP
HapMap
SNP
HapMap
12.4 years ago
shirley zhang
★ 1.0k
0
votes
0
replies
1.1k
views
How to make Illumina cluster files from HapMap
HapMap
HapMap
12.7 years ago
JiangZhengyu
▴ 40
0
votes
1
reply
1.5k
views
Help for snpMatrix
HapMap
HapMap
updated 13.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 13.0 years ago by
MLSC MANIPAL
▴ 120
0
votes
0
replies
1.1k
views
Help to access hapmap using biomart
HapMap
biomaRt
HapMap
biomaRt
13.0 years ago
MLSC MANIPAL
▴ 120
0
votes
0
replies
2.9k
views
Limma - RNA-Seq DE genes - Quantile normalized log transformed RPKM data
HapMap
limma
HapMap
limma
13.2 years ago
Gordon Smyth
52k
0
votes
1
reply
1.8k
views
biomaRt and HapMap
SNP
HapMap
biomaRt
SNP
HapMap
biomaRt
updated 13.6 years ago by
Steffen Durinck
▴ 540 • written 13.6 years ago by
Deidre
▴ 10
0
votes
0
replies
1.4k
views
Illumina CanineHD CNV & crlmm?
GO
HapMap
cdf
affy
crlmm
GO
HapMap
cdf
affy
crlmm
14.2 years ago
Matthew Ritchie
▴ 1000
0
votes
8
replies
2.1k
views
mouse SNPs
SNP
Annotation
GO
HapMap
annotate
SNP
Annotation
GO
HapMap
annotate
14.4 years ago
Glazko, Galina
▴ 350
0
votes
3
replies
1.4k
views
HapMap gene list
GO
HapMap
GO
HapMap
updated 14.5 years ago by
Kasper Daniel Hansen
★ 6.5k • written 14.5 years ago by
noxyport@gmail.com
▴ 20
0
votes
2
replies
1.4k
views
error from rsamtools on 1000 genomes
Cancer
HapMap
Rsamtools
genomes
Cancer
HapMap
Rsamtools
genomes
updated 14.6 years ago by
Martin Morgan
25k • written 14.6 years ago by
Sergii Ivakhno
▴ 100
0
votes
3
replies
1.4k
views
smlSet
SNP
HapMap
GGtools
SNP
HapMap
GGtools
updated 14.9 years ago by
Vincent J. Carey, Jr.
6.7k • written 14.9 years ago by
claire pujoll
▴ 30
0
votes
2
replies
1.4k
views
Strange output in GenABEL convert.snp.ped()
SNP
HapMap
SNP
HapMap
updated 15.0 years ago by
Martin Morgan
25k • written 15.0 years ago by
Paul Geeleher
★ 1.3k
0
votes
0
replies
836
views
Hapmap miRNA expression data
miRNA
HapMap
ArrayExpress
miRNA
HapMap
ArrayExpress
15.2 years ago
Paul Geeleher
★ 1.3k
0
votes
0
replies
1.6k
views
SNPs in High Linkage Disequilibrium
SNP
HapMap
SNP
HapMap
15.7 years ago
palermogp@libero.it
▴ 10
0
votes
3
replies
1.5k
views
Problem with justSNPRMA, library "oligo"
SNP
HapMap
SNP
HapMap
16.0 years ago
alessio boattini
▴ 30
0
votes
2
replies
1.4k
views
Problems with oligo and pd.genomewidesnp.6
SNP
Annotation
HapMap
SNP
Annotation
HapMap
updated 16.7 years ago by
Vincent J. Carey, Jr.
6.7k • written 16.7 years ago by
Jeremy Silver
▴ 10
0
votes
1
reply
1.2k
views
connect to HapMart with biomaRt
HapMap
biomaRt
HapMap
biomaRt
updated 16.7 years ago by
Steffen
▴ 500 • written 16.8 years ago by
Richard Pearson
▴ 390
0
votes
0
replies
1.1k
views
connect to HapMart with biomaRt
HapMap
biomaRt
HapMap
biomaRt
18.0 years ago
Steffen Durinck
▴ 580
24 results • Page
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Comment: GSVA on RNAseq data
by
Bob
▴ 10
Hi Robert, We were actually very interested in this problem in particular. It seems that using counts for gene sets with varying gene leng…
Comment: plyranges: find exact GRanges match keeping metadata columns
by
Michael Love
43k
But I will say if you are doing a lot of these, and require exact match, just making it a simple key -- eg `paste0(start,".",end)` -- seems…
Answer: Comparing Mock vs Infected in WT and Knockout Cells
by
Michael Love
43k
I recommend for questions about statistical analysis plan to meet with a local statistician or someone familiar with linear models in R. I …
Answer: In WGCNA, what networkType should be used in pickSoftThreshold for a Signed Nowi
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WGCNA is no Bioconductor package. Consider biostars.org or bioinformatics Reddit, but if you do show a bit more effort please. People appre…
Answer: Error: lexical error: invalid char in json text (alevin-seurat)
by
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★ 4.6k
Two things: 1) See https://bioconductor.org/packages/release/bioc/vignettes/tximport/inst/doc/tximport.html#Alevin -- Your `colon_file`…
Votes
A: how to extract Granges not overlapping with other ganges?
DESeq2 1.20.0 lfcshrink function
A: LIMMA on RT-PCR data
Answer: Efficiently working with HDF5-backed SingleCellExperiments
Efficiently working with HDF5-backed SingleCellExperiments
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ramiro.barrantes
▴ 10
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Vincent J. Carey, Jr.
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52k
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