Bioconductor Gpos

Showing : gpos • reset

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3.9k

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findOverlaps GPos GenomicRanges subsetByOverlaps

updated 2.8 years ago by James W. MacDonald 67k • written 2.9 years ago by Robert ▴ 10

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1.4k

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GenomicRanges unique GPos

3.3 years ago • updated 3.1 years ago maltethodberg ▴ 180

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844

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GenomicRanges GPos

4.5 years ago Charles Plessy ▴ 180

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1.2k

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genomicranges granges gpos

updated 5.4 years ago by Hervé Pagès 16k • written 6.1 years ago by maltethodberg ▴ 180

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1.2k

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genomicranges gpos granges

updated 6.1 years ago by Hervé Pagès 16k • written 6.1 years ago by maltethodberg ▴ 180

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1.3k

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software error snplocs gpos

updated 6.5 years ago by Hervé Pagès 16k • written 6.5 years ago by j.abbott • 0

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1.4k

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genomicranges gpos

updated 6.8 years ago by Hervé Pagès 16k • written 6.8 years ago by maltethodberg ▴ 180

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909

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genomicranges gpos

6.9 years ago maltethodberg ▴ 180

8 results • Page 1 of 1

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Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0

Hi Robert, Thank you for the explanation, But I am still little bit confused, Is the annotation package (TxDb.Hsapiens.UCSC.hg38.knownGene)…

Comment: Merge Replicates vs Mixed Model by abadgerw • 0

@gabrielhoffman any insight?

Comment: makeContrastsDream for Interaction by abadgerw • 0

@gabrielhoffman any insight?

Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta by Michael Love 42k

That is the rows that did converge.

Answer: Is my time course analysis with DESeq2 valid? by Michael Love 42k

For choosing the correct statistical design, I recommend working with a local statistician or someone familiar with linear models in R. I h…

Votes

A: Some questions for remove batch effect by using mnnCorrect

A: Recommendations for combining multiple 10x runs into one SingleCellExperiment

Answer: [How to construct a model.matrix ]

Answer: Handling biological replicates in DESeq2

Comment: biomaRt rnorvegicus_gene_ensembl not available anymore

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Popular Question to Michael Stadler ▴ 350

Scholar to ATpoint ★ 4.5k

Commentator to James W. MacDonald 67k

Popular Question to Stefano Mangiola ▴ 20