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gmapr
•
reset
0
votes
0
replies
130
views
gmapR source package contains x86_64 binaries
gmapR
5 weeks ago
Tom Lin
• 0
0
votes
1
reply
598
views
gmapR install failed
gmapR
updated 3.6 years ago by
Martin Morgan
25k • written 3.6 years ago by
conbward
• 0
1
vote
4
replies
1.0k
views
How can I create a GmapGenome that doesn't start at index 1?
gmapR
5.4 years ago
Kyle Johnsen
▴ 30
0
votes
5
replies
1.3k
views
Error in gmapR: gsnap not functioning
software error
gmapr
updated 5.6 years ago by
Michael Lawrence
★ 11k • written 5.6 years ago by
Amer Ghalawinji
• 0
0
votes
3
replies
984
views
cmetindex missing in gmapr? Not possible to do bisulfite alignments
gmapr
updated 6.7 years ago by
Michael Lawrence
★ 11k • written 6.7 years ago by
karl.nordstroem
• 0
0
votes
4
replies
1.5k
views
Can I create a GmapGenome with a relative file path?
gmapgenome
gmapr
fastafile
updated 7.1 years ago by
Michael Lawrence
★ 11k • written 7.1 years ago by
Kyle Johnsen
▴ 30
1
vote
4
replies
1.3k
views
gmapR failure to build TP53Genome in osx
gmapR
7.6 years ago
jls2282
• 0
3
votes
6
replies
1.5k
views
gmapR fills my tmp directory
gmapr
gmapgenome
updated 8.5 years ago by
Michael Lawrence
★ 11k • written 8.5 years ago by
sean.taylor
• 0
0
votes
10
replies
2.0k
views
Running gmap tool via gmapR package?
gmapR
updated 8.6 years ago by
Michael Lawrence
★ 11k • written 8.6 years ago by
Thomas Sandmann
▴ 90
1
vote
17
replies
1.9k
views
VariantTools problem causing R crash
varianttools
gmapr
updated 8.6 years ago by
Michael Lawrence
★ 11k • written 8.6 years ago by
Johannes Rainer
★ 2.1k
1
vote
4
replies
1.2k
views
Create a GmapGenome from a FaFile from AnnotationHub
gmapr
gmapgenome
annotationhub
fafile
updated 8.6 years ago by
Michael Lawrence
★ 11k • written 8.6 years ago by
Johannes Rainer
★ 2.1k
0
votes
3
replies
2.5k
views
Problems to create GmapGenome - gmapR
gmapR
GmapGenome
error
create
9.1 years ago
lelemraposo
• 0
0
votes
0
replies
940
views
gmapR: GsnapParam, does is support the --splicesites (-s) flag
gmapR
9.5 years ago
Chao-Jen Wong
▴ 580
0
votes
5
replies
1.9k
views
Complete variant toolbox: gmapR/VariantTools/VariantAnnotation
BiocViews
VariantAnnotation
Annotation
biocViews
Rsubread
VariantAnnotation
gmapR
BiocViews
10.6 years ago • updated 10.5 years ago
Thomas Girke
★ 1.7k
0
votes
1
reply
1.3k
views
gmapR problem using a GmapGenome package with gsnap()
GO
BSgenome
BSgenome
gmapR
GO
BSgenome
BSgenome
gmapR
updated 11.1 years ago by
Michael Lawrence
★ 11k • written 11.1 years ago by
Robert Castelo
★ 3.3k
0
votes
0
replies
1.5k
views
gmapR for R 3.0.0 installation problem?
gmapR
gmapR
11.3 years ago
Dan Tenenbaum
★ 8.2k
0
votes
2
replies
1.2k
views
where is exonsOnTP53Genome defined
gmapR
gmapR
updated 11.4 years ago by
Martin Morgan
25k • written 11.4 years ago by
Guest User
★ 13k
0
votes
2
replies
2.3k
views
gmapR/gsnap crashes
gmapR
gmapR
updated 11.4 years ago by
Michael Lawrence
★ 11k • written 11.4 years ago by
Tim Triche
★ 4.2k
0
votes
0
replies
1.2k
views
regarding mapping package
Cancer
genomes
Rsubread
gmapR
Cancer
genomes
Rsubread
gmapR
11.8 years ago
Martin Morgan
25k
19 results • Page
1 of 1
Recent ...
Replies
Comment: limma comparison for small sample size and how to get covariance matrix
by
Gordon Smyth
51k
Your MDS plot is better than before, but you are still not following the recommendation for making for making such plots given in the limma…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Also, ``` > result <- mapUniProt( from = "EMBL-GenBank-DDBJ_CDS", to = "UniProtKB", query = c("ACF95883.1") ) > result From…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Ugh, here's the link https://www.uniprot.org/id-mapping/uniprotkb/dd08aa16774d98ef087dc3bd708582012bba49e2/overview?fields=accession%2Cre…
Answer: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
The input should be 'EMBL-GenBank-DDBJ_CDS", as that is a GenBank ID.
Answer: XCMS2 of orbitrap data
by
Elodie
• 0
Hi, I have the same question, I have acquired MS2 data with PRM analysis and inclusion lists of several ions. I have a list of product ion…
Votes
Answer: EPIC array hg38 annotation?
Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
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