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gmapr
•
reset
0
votes
0
replies
372
views
gmapR source package contains x86_64 binaries
gmapR
11 months ago
Tom Lin
• 0
0
votes
1
reply
774
views
gmapR install failed
gmapR
updated 4.5 years ago by
Martin Morgan
25k • written 4.5 years ago by
conbward
• 0
1
vote
4
replies
1.3k
views
How can I create a GmapGenome that doesn't start at index 1?
gmapR
6.2 years ago
Kyle Johnsen
▴ 30
0
votes
5
replies
1.6k
views
Error in gmapR: gsnap not functioning
software error
gmapr
updated 6.4 years ago by
Michael Lawrence
★ 11k • written 6.4 years ago by
Amer Ghalawinji
• 0
0
votes
3
replies
1.3k
views
cmetindex missing in gmapr? Not possible to do bisulfite alignments
gmapr
updated 7.5 years ago by
Michael Lawrence
★ 11k • written 7.5 years ago by
karl.nordstroem
• 0
0
votes
4
replies
1.8k
views
Can I create a GmapGenome with a relative file path?
gmapgenome
gmapr
fastafile
updated 8.0 years ago by
Michael Lawrence
★ 11k • written 8.0 years ago by
Kyle Johnsen
▴ 30
1
vote
4
replies
1.5k
views
gmapR failure to build TP53Genome in osx
gmapR
8.4 years ago
jls2282
• 0
3
votes
6
replies
1.8k
views
gmapR fills my tmp directory
gmapr
gmapgenome
updated 9.3 years ago by
Michael Lawrence
★ 11k • written 9.3 years ago by
sean.taylor
• 0
0
votes
10
replies
2.4k
views
Running gmap tool via gmapR package?
gmapR
updated 9.4 years ago by
Michael Lawrence
★ 11k • written 9.5 years ago by
Thomas Sandmann
▴ 90
1
vote
17
replies
2.4k
views
VariantTools problem causing R crash
varianttools
gmapr
updated 9.4 years ago by
Michael Lawrence
★ 11k • written 9.4 years ago by
Johannes Rainer
★ 2.1k
1
vote
4
replies
1.5k
views
Create a GmapGenome from a FaFile from AnnotationHub
gmapr
gmapgenome
annotationhub
fafile
updated 9.4 years ago by
Michael Lawrence
★ 11k • written 9.4 years ago by
Johannes Rainer
★ 2.1k
0
votes
3
replies
2.8k
views
Problems to create GmapGenome - gmapR
gmapR
GmapGenome
error
create
9.9 years ago
lelemraposo
▴ 10
0
votes
0
replies
1.1k
views
gmapR: GsnapParam, does is support the --splicesites (-s) flag
gmapR
10.3 years ago
Chao-Jen Wong
▴ 580
0
votes
5
replies
2.3k
views
Complete variant toolbox: gmapR/VariantTools/VariantAnnotation
BiocViews
VariantAnnotation
Annotation
biocViews
Rsubread
VariantAnnotation
gmapR
BiocViews
11.4 years ago
Thomas Girke
★ 1.7k
0
votes
1
reply
1.5k
views
gmapR problem using a GmapGenome package with gsnap()
GO
BSgenome
BSgenome
gmapR
GO
BSgenome
BSgenome
gmapR
updated 12.0 years ago by
Michael Lawrence
★ 11k • written 12.0 years ago by
Robert Castelo
★ 3.4k
0
votes
0
replies
1.7k
views
gmapR for R 3.0.0 installation problem?
gmapR
gmapR
12.1 years ago
Dan Tenenbaum
★ 8.2k
0
votes
2
replies
1.3k
views
where is exonsOnTP53Genome defined
gmapR
gmapR
updated 12.2 years ago by
Martin Morgan
25k • written 12.2 years ago by
Guest User
★ 13k
0
votes
2
replies
2.5k
views
gmapR/gsnap crashes
gmapR
gmapR
updated 12.2 years ago by
Michael Lawrence
★ 11k • written 12.2 years ago by
Tim Triche
★ 4.2k
0
votes
0
replies
1.3k
views
regarding mapping package
Cancer
genomes
Rsubread
gmapR
Cancer
genomes
Rsubread
gmapR
12.7 years ago
Martin Morgan
25k
19 results • Page
1 of 1
Recent ...
Replies
Comment: Module membership vs gene significance result and Modules-trait relationships re
by
Vinaya
• 0
Hi. I am having the same issue, and haven't found a solution still.
Comment: Feature Counts - potential bug with outfile.jcounts
by
Tom
• 0
[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…
Comment: Filtering after DESeq
by
caroline.zanchi
• 0
I am going to try this right now, thanks !
Comment: Bioconductor 3.20 Release Schedule
by
randyprice13102000
• 0
This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/
Comment: Filtering after DESeq
by
ATpoint
★ 4.8k
The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …
Votes
Answer: CluserProfiler message "No gene can be mapped"
A: Minfi issue: return code from pthread_create() is 22
Comment: Filtering after DESeq
Answer: DiffBind; Error: No sites have activity greater than filter value
DiffBind; Error: No sites have activity greater than filter value
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