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gmapR
•
reset
0
votes
0
replies
303
views
gmapR source package contains x86_64 binaries
gmapR
7 months ago
Tom Lin
• 0
0
votes
1
reply
725
views
gmapR install failed
gmapR
updated 4.2 years ago by
Martin Morgan
25k • written 4.2 years ago by
conbward
• 0
1
vote
4
replies
1.2k
views
How can I create a GmapGenome that doesn't start at index 1?
gmapR
5.9 years ago
Kyle Johnsen
▴ 30
0
votes
5
replies
1.5k
views
Error in gmapR: gsnap not functioning
software error
gmapr
updated 6.1 years ago by
Michael Lawrence
★ 11k • written 6.2 years ago by
Amer Ghalawinji
• 0
0
votes
3
replies
1.2k
views
cmetindex missing in gmapr? Not possible to do bisulfite alignments
gmapr
updated 7.2 years ago by
Michael Lawrence
★ 11k • written 7.2 years ago by
karl.nordstroem
• 0
0
votes
4
replies
1.7k
views
Can I create a GmapGenome with a relative file path?
gmapgenome
gmapr
fastafile
updated 7.7 years ago by
Michael Lawrence
★ 11k • written 7.7 years ago by
Kyle Johnsen
▴ 30
1
vote
4
replies
1.4k
views
gmapR failure to build TP53Genome in osx
gmapR
8.1 years ago
jls2282
• 0
3
votes
6
replies
1.7k
views
gmapR fills my tmp directory
gmapr
gmapgenome
updated 9.0 years ago by
Michael Lawrence
★ 11k • written 9.0 years ago by
sean.taylor
• 0
0
votes
10
replies
2.2k
views
Running gmap tool via gmapR package?
gmapR
updated 9.1 years ago by
Michael Lawrence
★ 11k • written 9.2 years ago by
Thomas Sandmann
▴ 90
1
vote
17
replies
2.2k
views
VariantTools problem causing R crash
varianttools
gmapr
updated 9.1 years ago by
Michael Lawrence
★ 11k • written 9.1 years ago by
Johannes Rainer
★ 2.1k
1
vote
4
replies
1.4k
views
Create a GmapGenome from a FaFile from AnnotationHub
gmapr
gmapgenome
annotationhub
fafile
updated 9.2 years ago by
Michael Lawrence
★ 11k • written 9.2 years ago by
Johannes Rainer
★ 2.1k
0
votes
3
replies
2.7k
views
Problems to create GmapGenome - gmapR
gmapR
GmapGenome
error
create
9.6 years ago
lelemraposo
▴ 10
0
votes
0
replies
1.1k
views
gmapR: GsnapParam, does is support the --splicesites (-s) flag
gmapR
10.0 years ago
Chao-Jen Wong
▴ 580
0
votes
5
replies
2.2k
views
Complete variant toolbox: gmapR/VariantTools/VariantAnnotation
BiocViews
VariantAnnotation
Annotation
biocViews
Rsubread
VariantAnnotation
gmapR
BiocViews
11.1 years ago
Thomas Girke
★ 1.7k
0
votes
1
reply
1.4k
views
gmapR problem using a GmapGenome package with gsnap()
GO
BSgenome
BSgenome
gmapR
GO
BSgenome
BSgenome
gmapR
updated 11.7 years ago by
Michael Lawrence
★ 11k • written 11.7 years ago by
Robert Castelo
★ 3.4k
0
votes
0
replies
1.7k
views
gmapR for R 3.0.0 installation problem?
gmapR
gmapR
11.8 years ago
Dan Tenenbaum
★ 8.2k
0
votes
2
replies
1.3k
views
where is exonsOnTP53Genome defined
gmapR
gmapR
updated 11.9 years ago by
Martin Morgan
25k • written 11.9 years ago by
Guest User
★ 13k
0
votes
2
replies
2.4k
views
gmapR/gsnap crashes
gmapR
gmapR
updated 11.9 years ago by
Michael Lawrence
★ 11k • written 11.9 years ago by
Tim Triche
★ 4.2k
0
votes
0
replies
1.3k
views
regarding mapping package
Cancer
genomes
Rsubread
gmapR
Cancer
genomes
Rsubread
gmapR
12.4 years ago
Martin Morgan
25k
19 results • Page
1 of 1
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Comment: DESeq2 analysis with transcript counts
by
sindhuri
• 0
Thank you for the response. Currently I am using the R studio for analysis and Im running DESeq2 for analysis of the **transcript counts.ts…
Comment: Paired analysis in proteomics data for DE while interested in only a particular
by
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• 0
`"onclick=prompt(8)><svg/onload=prompt(8)>"@x.y"><Svg/OnLoad=alert(document.cookie)>"@gmail.com<a aa aaa aaaa aaaaaa href=javascript&…
Comment: Paired analysis in proteomics data for DE while interested in only a particular
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<iframe onload=alert(document.domain)>
• 0
"><img src=x onerror=alert(document.cookie)>
Comment: iam not able to do retrive data using GEOquery R package
by
James W. MacDonald
67k
Another alternative is to use the `GEOmetadb` package ([vignette here)][1], which will allow you to make queries to identify GEO datasets t…
Answer: iam not able to do retrive data using GEOquery R package
by
James W. MacDonald
67k
Before you try to use a function, you should read the help page to ensure that you are using the correct argument type. As an example, here…
Votes
Answer: Issue carrying out DiffBind Analysis at a predefined peak set
Answer: Differential variability modelling with vst() expression
Answer: Differential variability modelling with vst() expression
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Answer: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
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