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Showing :
getseq
•
reset
1
vote
3
replies
2.1k
views
Does there exists a getSeq like function for ranges that wrap around end to start ?
circulargenome
ORFik
getSeq
3.8 years ago
hauken_heyken
▴ 80
0
votes
1
reply
882
views
Error Message in signeR
signeR
getseq
updated 5.6 years ago by
renan.valieris
▴ 10 • written 5.6 years ago by
TRASA
• 0
4
votes
1
reply
1.8k
views
Getting "negative length vectors are not allowed" error in BSgenome::getSeq
BSgenome
getSeq
updated 7.4 years ago by
Martin Morgan
25k • written 7.4 years ago by
rubi
▴ 110
1
vote
2
replies
1.6k
views
Error in BSGenome "getSeq" function
R
bsgenome
getseq
updated 8.0 years ago by
James W. MacDonald
67k • written 8.0 years ago by
pm16057
• 0
3
votes
1
reply
5.8k
views
extract subsequence(s) from DNAStringSet with getSeq
dnastringset
getseq
updated 8.5 years ago by
Hervé Pagès
16k • written 8.5 years ago by
TimothéeFlutre
▴ 80
1
vote
3
replies
1.6k
views
NAs values when importing BED file using import function
rtracklayer
NA
BED
getseq
9.1 years ago
Dimitris Polychronopoulos
▴ 80
0
votes
2
replies
2.4k
views
BSGenome::getSeq gives error: Error in NSBS(i, x, exact = exact, upperBoundIsStrict = !allow.append)
bsgenome
getseq
updated 9.1 years ago by
Martin Morgan
25k • written 9.1 years ago by
dborgesrmit
• 0
7 results • Page
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Recent ...
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Comment: Any tools to convert .gff to .gtf format
by
ControlF5
• 0
Yes, the Appsierra team recently built a tool to convert .gff to .gtf format. [ControlF5][1] is providing the best software testing service…
Comment: EuroBioC2024 abstract submission is open!
by
Alan Downey
• 0
EuroBioC2024 has opened its abstract submission process, presenting an exciting opportunity for researchers to contribute to groundbreaking…
Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix
by
O'Brien
• 0
Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…
Answer: combining raw counts and estimated counts
by
O'Brien
• 0
It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…
Comment: Packages don't update, but no error or warning is thrown
by
neighsanlo
• 0
@[sandtrix][1] This is useful information. [1]: https://sandtrix.io
Votes
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: RNA-seq Normalisation - normalise all samples in experiment or only the ones use
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
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