Bioconductor Getseq

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circulargenome ORFik getSeq

3.9 years ago hauken_heyken ▴ 80

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903

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signeR getseq

updated 5.7 years ago by renan.valieris ▴ 10 • written 5.7 years ago by TRASA • 0

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1.9k

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BSgenome getSeq

updated 7.5 years ago by Martin Morgan 25k • written 7.5 years ago by rubi ▴ 110

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R bsgenome getseq

updated 8.1 years ago by James W. MacDonald 68k • written 8.1 years ago by pm16057 • 0

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5.8k

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dnastringset getseq

updated 8.6 years ago by Hervé Pagès 16k • written 8.6 years ago by TimothéeFlutre ▴ 80

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1.6k

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rtracklayer NA BED getseq

9.2 years ago Dimitris Polychronopoulos ▴ 80

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2.4k

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bsgenome getseq

updated 9.2 years ago by Martin Morgan 25k • written 9.2 years ago by dborgesrmit • 0

7 results • Page 1 of 1

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Answer: DESeq2 adujsted p-value cutoff seemingly not working by James W. MacDonald 68k

From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…

Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0

Thank you, I will try this and see.

Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0

Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…

Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status by Renuka • 0

how you did it pls explain

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by James W. MacDonald 68k

If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…

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A: Effect of lfcThreshold on p-value in DESeq2

Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet

What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =

Comment: Unused arguments error without used arguments in GSVA?

Awards • All

Scholar to James W. MacDonald 68k