Bioconductor Getgeo

Showing : getgeo • reset

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r geo getgeo

6.7 years ago jaleh.amo • 0

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geoquery getgeo probeset

updated 7.0 years ago by James W. MacDonald 68k • written 7.0 years ago by dnedveck • 0

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GEOquery getGEO

7.1 years ago rubi ▴ 110

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geoquery getgeo

updated 7.1 years ago by Sean Davis 21k • written 7.1 years ago by umahajan ▴ 10

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geoquery error getgeo microarray geo

updated 7.2 years ago by Sean Davis 21k • written 8.0 years ago by jblack29 • 0

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getGEO

updated 7.3 years ago by James W. MacDonald 68k • written 7.4 years ago by cg ▴ 10

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geoquery getgeo R

updated 8.0 years ago by James W. MacDonald 68k • written 8.0 years ago by rk489 • 0

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geoquery affymetrix microarrays windows8 getGEO

updated 8.0 years ago by Sean Davis 21k • written 8.0 years ago by svlachavas ▴ 840

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geoquery getgeo GEO

8.4 years ago hzc363 ▴ 20

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getgeo

9.1 years ago xishan78 • 0

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getgeo r

9.1 years ago alptaciroglu ▴ 50

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getGEO

9.1 years ago maedakus ▴ 10

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geoquery getgeo

9.2 years ago rfb • 0

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getgeo geoquery

updated 9.2 years ago by Gordon Smyth 52k • written 9.2 years ago by maedakus ▴ 10

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getGEO R GEOquery

9.5 years ago alptaciroglu ▴ 50

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geoquery getGEO

9.6 years ago Prasanth ▴ 20

16 results • Page 1 of 1

Recent ...

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Comment: DESeq2 - human data, weird results, troubleshooting by bd2000 ▴ 30

I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin by James W. MacDonald 68k

The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…

Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0

Thank you so much for sharing the link.

Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0

I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…

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Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

what the test method for enrichGO in clusterProfiler?

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