Bioconductor GetSeq

Showing : getSeq • reset

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2.0k

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circulargenome ORFik getSeq

3.6 years ago hauken_heyken ▴ 80

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851

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signeR getseq

updated 5.5 years ago by renan.valieris ▴ 10 • written 5.5 years ago by TRASA • 0

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1.8k

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BSgenome getSeq

updated 7.3 years ago by Martin Morgan 25k • written 7.3 years ago by rubi ▴ 110

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1.5k

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R bsgenome getseq

updated 7.8 years ago by James W. MacDonald 67k • written 7.8 years ago by pm16057 • 0

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5.7k

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dnastringset getseq

updated 8.3 years ago by Hervé Pagès 16k • written 8.3 years ago by TimothéeFlutre ▴ 80

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1.6k

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rtracklayer NA BED getseq

9.0 years ago Dimitris Polychronopoulos ▴ 80

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2.4k

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bsgenome getseq

updated 9.0 years ago by Martin Morgan 25k • written 9.0 years ago by dborgesrmit • 0

7 results • Page 1 of 1

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Comment: Problem at champ.load by icecreamlover • 0

Hello! Were you able to figure this out? I am running into the same error!

Comment: ChAMP - obtaining beta values using EPICv2 annotation by icecreamlover • 0

Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…

Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0

Can this please be revisited and corrected ASAP? I'm encountering the same issue, using a slightly more modern version of R (4.1.0). It s…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Thank you!

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Hi Gordon, Thanks for the answer! This makes a lot of sense. Your suggested pipeline (separate processing of datasets -> gene set analyses…

Votes

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

A: p.adjust BH generates duplicate values

Answer: Adjusted p-values become NA when sub-setting samples

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Popular Question to Guido Hooiveld ★ 4.1k