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Showing :
getGEO
•
reset
2
votes
6
replies
1.5k
views
error reading GSE using getGEO()
r
geo
getgeo
6.0 years ago
jaleh.amo
• 0
2
votes
2
replies
1.3k
views
getGEO from GEOquery doesn't return probesets
geoquery
getgeo
probeset
updated 6.3 years ago by
James W. MacDonald
66k • written 6.3 years ago by
dnedveck
• 0
3
votes
2
replies
3.2k
views
getGEO error when trying to download a series matrix file
GEOquery
getGEO
6.3 years ago
rubi
▴ 110
3
votes
4
replies
1.4k
views
getGEO Error: Duplicate identifiers for rows
geoquery
getgeo
updated 6.3 years ago by
Sean Davis
21k • written 6.3 years ago by
umahajan
▴ 10
3
votes
11
replies
4.1k
views
GEOquery http:// url error
geoquery
error
getgeo
microarray
geo
updated 6.4 years ago by
Sean Davis
21k • written 7.2 years ago by
jblack29
• 0
3
votes
1
reply
1.2k
views
getGEO Error: Duplicate identifiers for rows
getGEO
updated 6.6 years ago by
James W. MacDonald
66k • written 6.6 years ago by
cg
▴ 10
0
votes
2
replies
1.7k
views
Error in GEOquery
geoquery
getgeo
R
updated 7.2 years ago by
James W. MacDonald
66k • written 7.2 years ago by
rk489
• 0
2
votes
2
replies
1.6k
views
Problem with GEOquery R package in Windows when trying to download specific GEO processed data
geoquery
affymetrix microarrays
windows8
getGEO
updated 7.2 years ago by
Sean Davis
21k • written 7.2 years ago by
svlachavas
▴ 830
2
votes
2
replies
2.2k
views
GEOquery error in downloading SOFT files
geoquery
getgeo
GEO
7.6 years ago
hzc363
▴ 20
0
votes
2
replies
2.1k
views
Why getGEO returns an expressionset with zero features ?
getgeo
8.3 years ago
xishan78
• 0
0
votes
0
replies
979
views
getGEO is taking too long time for a file that is already locally cached
getgeo
r
8.3 years ago
alptaciroglu
▴ 50
0
votes
1
reply
3.7k
views
getGEO Failed to connect to ftp.ncbi.nlm.nih.gov port 21: Timed out
getGEO
8.4 years ago
maedakus
▴ 10
2
votes
4
replies
1.6k
views
GEOquery: Shifted data columns in phenotype data
geoquery
getgeo
8.5 years ago
rfb
• 0
2
votes
2
replies
1.8k
views
getGEO error
getgeo
geoquery
updated 8.5 years ago by
Gordon Smyth
51k • written 8.5 years ago by
maedakus
▴ 10
4
votes
8
replies
7.1k
views
getGEO - cannot Open URL issue
getGEO
R
GEOquery
8.7 years ago
alptaciroglu
▴ 50
2
votes
4
replies
2.9k
views
getGEO function not identifying local file
geoquery
getGEO
8.8 years ago
Prasanth
▴ 20
16 results • Page
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Recent ...
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Comment: Ranking the GSEA Results
by
Lluís Revilla Sancho
▴ 730
You can have the ranking without the cutoff. If you don't keep any gene set after the cutoff then there is nothing to rank as you said, so…
Answer: Create a Graph w/ Only the Genes Interaction
by
Antonio
• 0
Thank you all, I solved my issue by creating a for loop. Cheers!
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Where did you see ranking of genes by `log2FC * (-log10 p-value)`? I don't think I ever saw one and not sure what it should achieve. Aren't…
Comment: Trouble Installing DADA2 (warning: R new user)
by
shepherl
3.9k
As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…
Votes
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features
Comment: How to get the DMR?
Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it
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