Showing : genvisR • reset
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GenVisR - adding on genomic positions to CovGen graph
GenVisR GenCov
2.1 years ago Amy_ • 0
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10
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3.4k
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error in package GenVisR while installing
GenVisR GenVis
updated 12 months ago by ▴ 30 • written 2.4 years ago by • 0
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1.3k
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Unable to install GenVisR under most recent R / Bioconductor version; waterfall option mainDropMut is not working
Install mainDropMut GenVisR
updated 2.5 years ago by 16k • written 2.5 years ago by • 0
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How to generate a waterfall plot of mutations and CNAs that don't overlap
GenVisR maftools
2.5 years ago e • 0
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1.2k
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Waterfall failing with custom file: Error in `colnames<-`(`*tmp*`, value = c("sample", "gene", "trv_type")) : attempt to set 'colnames' on an obje…
variants waterfall GenVisR
updated 4.0 years ago by ▴ 30 • written 4.0 years ago by ▴ 10
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841
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Adding layer to legend in waterfall plot
GenVisR ggplot2 waterfall
5.1 years ago sheneicechang • 0
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1.1k
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Output GenVisR mutation frequency data by gene name instead of by sample name
GenVisR mutation frequency R cancer bioconductor
5.2 years ago sheneicechang • 0
0
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1
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1.2k
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how to save picture and add title to waterfall GenVisR mutation analyse?
GenVisr genvisr waterfall mutation
updated 6.0 years ago by ▴ 30 • written 6.0 years ago by • 0
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990
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Issues with lohSpec
genvisr lohSpec
6.4 years ago dharia.priyadarshani • 0
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2
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1.4k
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Copy Number plot cnSpec - how to order samples
genvisr
6.5 years ago cedric.vmdl • 0
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4
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2.2k
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GenVisR- cnSpec CNV plot
GenVisR
6.8 years ago daijieqiong ▴ 10
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2
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1.4k
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an error in TvTi: package GenVisR
GenVisR
updated 7.8 years ago by ▴ 30 • written 7.8 years ago by ▴ 670
2
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5
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3.0k
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GenVisR Installation error message
genvisR
8.8 years ago • updated 8.7 years ago Deep Adhya ▴ 20
13 results • Page 1 of 1
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Answer: Deseq2 res Function by Michael Love 43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
Answer: ANOVA like approach of edgeR by Gordon Smyth 51k
You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…
Answer: Create Illmina bead summary data by Gordon Smyth 51k
GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…
Comment: Help with RSEM counts: do I transpose matrix? by NB • 0
OK thank you.
Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k
You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.
Votes
Answer: Deseq2 res Function
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
Answer: ANOVA like approach of edgeR
Answer: ANOVA like approach of edgeR
Comment: ANOVA like approach of edgeR
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