Showing : genvisR • reset
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GenVisR - adding on genomic positions to CovGen graph
GenVisR GenCov
21 months ago Amy_ • 0
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10
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error in package GenVisR while installing
GenVisR GenVis
updated 7 months ago by ▴ 30 • written 23 months ago by • 0
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Unable to install GenVisR under most recent R / Bioconductor version; waterfall option mainDropMut is not working
Install mainDropMut GenVisR
updated 2.1 years ago by 16k • written 2.1 years ago by • 0
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How to generate a waterfall plot of mutations and CNAs that don't overlap
GenVisR maftools
2.1 years ago e • 0
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1.1k
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Waterfall failing with custom file: Error in `colnames<-`(`*tmp*`, value = c("sample", "gene", "trv_type")) : attempt to set 'colnames' on an obje…
variants waterfall GenVisR
updated 3.6 years ago by ▴ 30 • written 3.6 years ago by ▴ 10
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732
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Adding layer to legend in waterfall plot
GenVisR ggplot2 waterfall
4.7 years ago sheneicechang • 0
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Output GenVisR mutation frequency data by gene name instead of by sample name
GenVisR mutation frequency R cancer bioconductor
4.8 years ago sheneicechang • 0
0
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1.1k
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how to save picture and add title to waterfall GenVisR mutation analyse?
GenVisr genvisr waterfall mutation
updated 5.6 years ago by ▴ 30 • written 5.6 years ago by • 0
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877
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Issues with lohSpec
genvisr lohSpec
6.0 years ago dharia.priyadarshani • 0
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1.2k
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Copy Number plot cnSpec - how to order samples
genvisr
6.1 years ago cedric.vmdl • 0
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2.0k
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GenVisR- cnSpec CNV plot
GenVisR
6.5 years ago • updated 6.4 years ago daijieqiong ▴ 10
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an error in TvTi: package GenVisR
GenVisR
updated 7.4 years ago by ▴ 30 • written 7.4 years ago by ▴ 670
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5
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GenVisR Installation error message
genvisR
8.4 years ago • updated 8.3 years ago Deep Adhya ▴ 20
13 results • Page 1 of 1
Recent ...
Replies
Comment: Ranking the GSEA Results by Lluís Revilla Sancho ▴ 730
You can have the ranking without the cutoff. If you don't keep any gene set after the cutoff then there is nothing to rank as you said, so…
Answer: Create a Graph w/ Only the Genes Interaction by Antonio • 0
Thank you all, I solved my issue by creating a for loop. Cheers!
Comment: Ranking the GSEA Results by alserg ▴ 270
Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself
Comment: Ranking the GSEA Results by alserg ▴ 270
Where did you see ranking of genes by `log2FC * (-log10 p-value)`? I don't think I ever saw one and not sure what it should achieve. Aren't…
Comment: Trouble Installing DADA2 (warning: R new user) by shepherl 3.9k
As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…
Votes
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features
Comment: How to get the DMR?
Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it
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