Bioconductor Genomicscores

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txdbmaker GenomicScores phastCons100way.UCSC.hg38 GenomicFeatures

3 months ago rania.alanany • 0

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1.6k

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GenomicScores

updated 2.5 years ago by Robert Castelo ★ 3.4k • written 2.7 years ago by Robert • 0

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3.0k

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GenomicScores MafH5.gnomAD.v3.1.1.GRCh38

updated 2.7 years ago by Robert Castelo ★ 3.4k • written 2.9 years ago by Robert • 0

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1.9k

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GenomicScores

updated 3.5 years ago by Robert Castelo ★ 3.4k • written 3.5 years ago by nattzy94 ▴ 20

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4.3k

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genomicscores granges phastCons100way.UCSC.hg38 r rtracklayer

updated 3 months ago by rania.alanany • 0 • written 5.0 years ago by Biologist ▴ 120

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Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Comment: orgDB by jenniferping36 • 0

Thanks for the suggestion! I'll check out the resources.

Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

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Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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