Bioconductor Gene set testing

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815

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mroast camera gene set testing

4.5 years ago svlachavas ▴ 840

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2.8k

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limma camera gene set testing ensembl

updated 5.3 years ago by Robert Castelo ★ 3.4k • written 5.3 years ago by Jeremy Beales ▴ 10

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1.7k

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limma agilent microarrays mroast fry gene tests gene set testing

updated 6.5 years ago by Gordon Smyth 52k • written 6.5 years ago by svlachavas ▴ 840

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1.8k

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limma camera cameraPR edgeR gene set testing

updated 6.6 years ago by Gordon Smyth 52k • written 6.6 years ago by jamie.gearing ▴ 60

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1.5k

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limma roast statistics source code gene set testing

6.6 years ago Andrea Carenzo • 0

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1.6k

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gage gene set testing

updated 6.9 years ago by Luo Weijun ★ 1.6k • written 6.9 years ago by Aurora ▴ 20

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2.1k

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EGSEA gene set testing vooma limma voom gsea

updated 10 months ago by Chris ▴ 20 • written 8.2 years ago by Pekka Kohonen ▴ 190

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2.3k

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limma agilent microarrays gene set testing annotation

8.2 years ago Bouzid.a ▴ 20

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2.9k

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R DESeq2 gene set testing gene expression

8.4 years ago Jon Bråte ▴ 260

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1.9k

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gene set testing camera edger

updated 8.7 years ago by Gordon Smyth 52k • written 8.7 years ago by le2336 ▴ 20

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1.6k

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gsea ncrna coexpression gene set analysis gene set testing

8.9 years ago m.fletcher ▴ 20

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limma camera gene set testing

9.0 years ago claire.n.levy ▴ 10

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3.5k

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limma mroast barcodeplot KEGG gene set testing

updated 9.3 years ago by Gordon Smyth 52k • written 9.3 years ago by svlachavas ▴ 840

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2.2k

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gene set testing roast mroast differential gene expression bioconductor

9.9 years ago svlachavas ▴ 840

14 results • Page 1 of 1

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Comment: Co-occurrence Network Analysis between Algae and Bacteria by solarsunyy • 0

Deploy powerful missiles that generate large-scale explosions, resulting in the [solar smash online][1] formation of substantial craters on…

Comment: Phyloseq: How to add sample table to phyloseq object by chillykean • 0

@[Chill Guy Clicker][1]: You can add sample_table by creating a data frame containing sample information and using sample_data(myobject) <-…

Comment: Issue with Soft-Thresholding in WGCNA by dirty.cougar.risi • 0

Interesting data! Looking at these genes, it's like navigating a complex maze. The fluctuating values remind me of chasing high scores in […

Answer: compute_fasta_digest does not match Salmon index hash by Michael Love 43k

Can you provide more details on when this is happening? The salmon index is the definitive hash associated with the quant files, so I'm con…

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species by James W. MacDonald 68k

Oh wait. You want to map from Ensembl to NCBI? That's hard to do with model organisms, let alone non-model. This `OrgDb` doesn't have Ensem…

Votes

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

what the test method for enrichGO in clusterProfiler?

A: single-cells RNA-seq analysis by MAST with unbalanced group size

Comment: plyranges: find exact GRanges match keeping metadata columns

Awards • All

Scholar to Michael Love 43k